Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M08
(433 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 129 8e-31
SB_16167| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_20502| Best HMM Match : Ank (HMM E-Value=4.2) 30 0.71
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 30 0.71
SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6) 30 0.93
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_37325| Best HMM Match : Nin1_C (HMM E-Value=3.3e-07) 28 3.8
SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32) 27 5.0
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 27 8.7
SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 129 bits (312), Expect = 8e-31
Identities = 62/143 (43%), Positives = 97/143 (67%), Gaps = 1/143 (0%)
Frame = +1
Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186
YDGE +D + + +V +P++ EFS ETA KIFGG +K+H+LLF +K +D F+ E
Sbjct: 232 YDGE-YDFEKIQQFVKANQLPLVTEFSDETAPKIFGGDVKHHILLFTNKTSDGFKATHEA 290
Query: 187 LKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL-EQDMAKYKPTTDE 363
AK+++ K++ V ++ + +++QRI+EFFG++ E+P RLI L + DM KYKPT E
Sbjct: 291 FTGGAKDFKGKVLFVYVNTEVEDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAE 350
Query: 364 LSANAVEEFVQSFFAGTLETHLL 432
+++ V+EFVQ+F L+ HLL
Sbjct: 351 ITSENVKEFVQAFLDKKLKPHLL 373
>SB_16167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 31.5 bits (68), Expect = 0.31
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Frame = +1
Query: 1 VKYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYV 180
+ Y G D + K W + +P++ E + E A ++ + LL + + E++
Sbjct: 275 IVYTGSLTDFEHLKQWTNDKCIPLVREITFENAEELTEEGKPFLLLFYDPNDHHSIEEFK 334
Query: 181 EELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALE--QDMAKYKPT 354
EE+ + ++ + D + H L G ++++P LIA++ + M +
Sbjct: 335 EEVAKQLVGEKGQMNFLIADGHKFSHP--LHHLGKSQQDLP---LIAIDSFRHMYLFPKF 389
Query: 355 TDELSANAVEEFVQSFFAGTL 417
D +++F +G L
Sbjct: 390 EDIRIPGRLKQFTDDLHSGKL 410
>SB_20502| Best HMM Match : Ank (HMM E-Value=4.2)
Length = 396
Score = 30.3 bits (65), Expect = 0.71
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 115 GQIKYHLLLFLSKKADTFEKYV-EELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMK 288
G + H LF TF+K + EEL PVA + D+ M I DED+ + + + F MK
Sbjct: 341 GWVSLHEELFRHHHKRTFQKRIEEELMPVAW-HPDRFMDWCI--DEDQRKELGKLFRMK 396
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 30.3 bits (65), Expect = 0.71
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL 324
L+K+ D K E++ + +DKLMT I A + H+ I E+ + ++I +
Sbjct: 1647 LNKEKDGLLKARYEVEQELREAKDKLMTAEIQARNNAHREISEYQAKFSDAEQKYQMILI 1706
Query: 325 EQ 330
E+
Sbjct: 1707 EK 1708
>SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6)
Length = 260
Score = 29.9 bits (64), Expect = 0.93
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 366 KLIGGRFVLSHVLF-ESDQSCRWNFFLLHAEEL*DSLVFILVGV 238
+L+ G + L+ ++F E+D+ +W ++ H L SL FIL GV
Sbjct: 11 RLVIGIYCLAWMMFVETDEGYKWFLYINHWNFLALSLYFILAGV 54
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 112 GGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDE 255
G +K + F+++ + E++V + YRD +ID D+DE
Sbjct: 623 GANVKEKIGHFIAESSQPVERHVSSTDRPGRRYRDVQPVFSIDDDDDE 670
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGM---KKEEVP-AARLIALEQDMAK 342
Y+ E +A+ ++ + DAD +EHQ +E G+ EE P +A +I ++ D +
Sbjct: 659 YMVEAPEIAE-MESRVASSVKDADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQ 717
Query: 343 YKP 351
KP
Sbjct: 718 EKP 720
>SB_37325| Best HMM Match : Nin1_C (HMM E-Value=3.3e-07)
Length = 178
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE----DEHQRILEFFGMKKEEV 300
L + +FE+Y+ LKP +YRD++ T + + E R+L F G K +V
Sbjct: 75 LKEDIPSFERYMAMLKPYYLDYRDEIATCMEKSYQKVSIPETTRMLYFEGEKSMKV 130
>SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32)
Length = 323
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 244 DEDEHQRILEFFGMKKEEVPA-----ARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
DE + ++I++ G + +E + ARL L+ ++ K DE+ + + EF+++
Sbjct: 100 DERDEEKIIDVVGEETKETASGKAKNARLERLDDELEKMLQGNDEIISREIREFLEN 156
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 208 YRDKLMTVAIDADEDEHQRILEFF--GMKKEEVPAARLIALEQDMAKYKPTTDELSAN 375
YR K M I + + QR + F G+ EV A + L Q Y P DEL+++
Sbjct: 394 YRWKRMPFGISSAPEVFQRKMHEFAEGLTGTEVVADDFLYLSQFRKGYTPDIDELTSH 451
>SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 139 LFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEV 300
L L + + E+ +EE+K K +D++M + ++ +++L K EEV
Sbjct: 267 LSLIQNSQETEEALEEMKQTIKQTQDRMMFSYGEFKAEDQEKMLAALNKKVEEV 320
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 121 IKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILE 273
I+Y++L ++KK F+K +E+ + +A+ ++DEH+ IL+
Sbjct: 1095 IQYYILATIAKKQPVFDKLMEDGRDMAERMEP-------GEEKDEHEAILK 1138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,654,212
Number of Sequences: 59808
Number of extensions: 222017
Number of successful extensions: 772
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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