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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M08
         (433 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)                129   8e-31
SB_16167| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.31 
SB_20502| Best HMM Match : Ank (HMM E-Value=4.2)                       30   0.71 
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)         30   0.71 
SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6)                    30   0.93 
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.2  
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_37325| Best HMM Match : Nin1_C (HMM E-Value=3.3e-07)                28   3.8  
SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32)               27   5.0  
SB_49367| Best HMM Match : AAA (HMM E-Value=0)                         27   8.7  
SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  

>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
          Length = 536

 Score =  129 bits (312), Expect = 8e-31
 Identities = 62/143 (43%), Positives = 97/143 (67%), Gaps = 1/143 (0%)
 Frame = +1

Query: 7   YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186
           YDGE +D +  + +V    +P++ EFS ETA KIFGG +K+H+LLF +K +D F+   E 
Sbjct: 232 YDGE-YDFEKIQQFVKANQLPLVTEFSDETAPKIFGGDVKHHILLFTNKTSDGFKATHEA 290

Query: 187 LKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL-EQDMAKYKPTTDE 363
               AK+++ K++ V ++ + +++QRI+EFFG++  E+P  RLI L + DM KYKPT  E
Sbjct: 291 FTGGAKDFKGKVLFVYVNTEVEDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAE 350

Query: 364 LSANAVEEFVQSFFAGTLETHLL 432
           +++  V+EFVQ+F    L+ HLL
Sbjct: 351 ITSENVKEFVQAFLDKKLKPHLL 373


>SB_16167| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 488

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
 Frame = +1

Query: 1   VKYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYV 180
           + Y G   D +  K W   + +P++ E + E A ++      + LL +      + E++ 
Sbjct: 275 IVYTGSLTDFEHLKQWTNDKCIPLVREITFENAEELTEEGKPFLLLFYDPNDHHSIEEFK 334

Query: 181 EELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALE--QDMAKYKPT 354
           EE+       + ++  +  D  +  H   L   G  ++++P   LIA++  + M  +   
Sbjct: 335 EEVAKQLVGEKGQMNFLIADGHKFSHP--LHHLGKSQQDLP---LIAIDSFRHMYLFPKF 389

Query: 355 TDELSANAVEEFVQSFFAGTL 417
            D      +++F     +G L
Sbjct: 390 EDIRIPGRLKQFTDDLHSGKL 410


>SB_20502| Best HMM Match : Ank (HMM E-Value=4.2)
          Length = 396

 Score = 30.3 bits (65), Expect = 0.71
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 115 GQIKYHLLLFLSKKADTFEKYV-EELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMK 288
           G +  H  LF      TF+K + EEL PVA  + D+ M   I  DED+ + + + F MK
Sbjct: 341 GWVSLHEELFRHHHKRTFQKRIEEELMPVAW-HPDRFMDWCI--DEDQRKELGKLFRMK 396


>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
          Length = 2024

 Score = 30.3 bits (65), Expect = 0.71
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +1

Query: 145  LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL 324
            L+K+ D   K   E++   +  +DKLMT  I A  + H+ I E+     +     ++I +
Sbjct: 1647 LNKEKDGLLKARYEVEQELREAKDKLMTAEIQARNNAHREISEYQAKFSDAEQKYQMILI 1706

Query: 325  EQ 330
            E+
Sbjct: 1707 EK 1708


>SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6)
          Length = 260

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -2

Query: 366 KLIGGRFVLSHVLF-ESDQSCRWNFFLLHAEEL*DSLVFILVGV 238
           +L+ G + L+ ++F E+D+  +W  ++ H   L  SL FIL GV
Sbjct: 11  RLVIGIYCLAWMMFVETDEGYKWFLYINHWNFLALSLYFILAGV 54


>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1616

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 112 GGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDE 255
           G  +K  +  F+++ +   E++V       + YRD     +ID D+DE
Sbjct: 623 GANVKEKIGHFIAESSQPVERHVSSTDRPGRRYRDVQPVFSIDDDDDE 670


>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1234

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = +1

Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGM---KKEEVP-AARLIALEQDMAK 342
           Y+ E   +A+    ++ +   DAD +EHQ  +E  G+     EE P +A +I ++ D  +
Sbjct: 659 YMVEAPEIAE-MESRVASSVKDADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQ 717

Query: 343 YKP 351
            KP
Sbjct: 718 EKP 720


>SB_37325| Best HMM Match : Nin1_C (HMM E-Value=3.3e-07)
          Length = 178

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +1

Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE----DEHQRILEFFGMKKEEV 300
           L +   +FE+Y+  LKP   +YRD++ T    + +     E  R+L F G K  +V
Sbjct: 75  LKEDIPSFERYMAMLKPYYLDYRDEIATCMEKSYQKVSIPETTRMLYFEGEKSMKV 130


>SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32)
          Length = 323

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = +1

Query: 244 DEDEHQRILEFFGMKKEEVPA-----ARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
           DE + ++I++  G + +E  +     ARL  L+ ++ K     DE+ +  + EF+++
Sbjct: 100 DERDEEKIIDVVGEETKETASGKAKNARLERLDDELEKMLQGNDEIISREIREFLEN 156


>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
          Length = 976

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 208 YRDKLMTVAIDADEDEHQRILEFF--GMKKEEVPAARLIALEQDMAKYKPTTDELSAN 375
           YR K M   I +  +  QR +  F  G+   EV A   + L Q    Y P  DEL+++
Sbjct: 394 YRWKRMPFGISSAPEVFQRKMHEFAEGLTGTEVVADDFLYLSQFRKGYTPDIDELTSH 451


>SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +1

Query: 139 LFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEV 300
           L L + +   E+ +EE+K   K  +D++M    +   ++ +++L     K EEV
Sbjct: 267 LSLIQNSQETEEALEEMKQTIKQTQDRMMFSYGEFKAEDQEKMLAALNKKVEEV 320


>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6406

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +1

Query: 121  IKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILE 273
            I+Y++L  ++KK   F+K +E+ + +A+             ++DEH+ IL+
Sbjct: 1095 IQYYILATIAKKQPVFDKLMEDGRDMAERMEP-------GEEKDEHEAILK 1138


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,654,212
Number of Sequences: 59808
Number of extensions: 222017
Number of successful extensions: 772
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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