BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M08 (433 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 129 8e-31 SB_16167| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31 SB_20502| Best HMM Match : Ank (HMM E-Value=4.2) 30 0.71 SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 30 0.71 SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6) 30 0.93 SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2 SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2 SB_37325| Best HMM Match : Nin1_C (HMM E-Value=3.3e-07) 28 3.8 SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32) 27 5.0 SB_49367| Best HMM Match : AAA (HMM E-Value=0) 27 8.7 SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7 >SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) Length = 536 Score = 129 bits (312), Expect = 8e-31 Identities = 62/143 (43%), Positives = 97/143 (67%), Gaps = 1/143 (0%) Frame = +1 Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186 YDGE +D + + +V +P++ EFS ETA KIFGG +K+H+LLF +K +D F+ E Sbjct: 232 YDGE-YDFEKIQQFVKANQLPLVTEFSDETAPKIFGGDVKHHILLFTNKTSDGFKATHEA 290 Query: 187 LKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL-EQDMAKYKPTTDE 363 AK+++ K++ V ++ + +++QRI+EFFG++ E+P RLI L + DM KYKPT E Sbjct: 291 FTGGAKDFKGKVLFVYVNTEVEDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAE 350 Query: 364 LSANAVEEFVQSFFAGTLETHLL 432 +++ V+EFVQ+F L+ HLL Sbjct: 351 ITSENVKEFVQAFLDKKLKPHLL 373 >SB_16167| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 488 Score = 31.5 bits (68), Expect = 0.31 Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 2/141 (1%) Frame = +1 Query: 1 VKYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYV 180 + Y G D + K W + +P++ E + E A ++ + LL + + E++ Sbjct: 275 IVYTGSLTDFEHLKQWTNDKCIPLVREITFENAEELTEEGKPFLLLFYDPNDHHSIEEFK 334 Query: 181 EELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALE--QDMAKYKPT 354 EE+ + ++ + D + H L G ++++P LIA++ + M + Sbjct: 335 EEVAKQLVGEKGQMNFLIADGHKFSHP--LHHLGKSQQDLP---LIAIDSFRHMYLFPKF 389 Query: 355 TDELSANAVEEFVQSFFAGTL 417 D +++F +G L Sbjct: 390 EDIRIPGRLKQFTDDLHSGKL 410 >SB_20502| Best HMM Match : Ank (HMM E-Value=4.2) Length = 396 Score = 30.3 bits (65), Expect = 0.71 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +1 Query: 115 GQIKYHLLLFLSKKADTFEKYV-EELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMK 288 G + H LF TF+K + EEL PVA + D+ M I DED+ + + + F MK Sbjct: 341 GWVSLHEELFRHHHKRTFQKRIEEELMPVAW-HPDRFMDWCI--DEDQRKELGKLFRMK 396 >SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) Length = 2024 Score = 30.3 bits (65), Expect = 0.71 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = +1 Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL 324 L+K+ D K E++ + +DKLMT I A + H+ I E+ + ++I + Sbjct: 1647 LNKEKDGLLKARYEVEQELREAKDKLMTAEIQARNNAHREISEYQAKFSDAEQKYQMILI 1706 Query: 325 EQ 330 E+ Sbjct: 1707 EK 1708 >SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6) Length = 260 Score = 29.9 bits (64), Expect = 0.93 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -2 Query: 366 KLIGGRFVLSHVLF-ESDQSCRWNFFLLHAEEL*DSLVFILVGV 238 +L+ G + L+ ++F E+D+ +W ++ H L SL FIL GV Sbjct: 11 RLVIGIYCLAWMMFVETDEGYKWFLYINHWNFLALSLYFILAGV 54 >SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1616 Score = 29.5 bits (63), Expect = 1.2 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +1 Query: 112 GGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDE 255 G +K + F+++ + E++V + YRD +ID D+DE Sbjct: 623 GANVKEKIGHFIAESSQPVERHVSSTDRPGRRYRDVQPVFSIDDDDDE 670 >SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1234 Score = 28.7 bits (61), Expect = 2.2 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Frame = +1 Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGM---KKEEVP-AARLIALEQDMAK 342 Y+ E +A+ ++ + DAD +EHQ +E G+ EE P +A +I ++ D + Sbjct: 659 YMVEAPEIAE-MESRVASSVKDADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQ 717 Query: 343 YKP 351 KP Sbjct: 718 EKP 720 >SB_37325| Best HMM Match : Nin1_C (HMM E-Value=3.3e-07) Length = 178 Score = 27.9 bits (59), Expect = 3.8 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +1 Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE----DEHQRILEFFGMKKEEV 300 L + +FE+Y+ LKP +YRD++ T + + E R+L F G K +V Sbjct: 75 LKEDIPSFERYMAMLKPYYLDYRDEIATCMEKSYQKVSIPETTRMLYFEGEKSMKV 130 >SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32) Length = 323 Score = 27.5 bits (58), Expect = 5.0 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 244 DEDEHQRILEFFGMKKEEVPA-----ARLIALEQDMAKYKPTTDELSANAVEEFVQS 399 DE + ++I++ G + +E + ARL L+ ++ K DE+ + + EF+++ Sbjct: 100 DERDEEKIIDVVGEETKETASGKAKNARLERLDDELEKMLQGNDEIISREIREFLEN 156 >SB_49367| Best HMM Match : AAA (HMM E-Value=0) Length = 976 Score = 26.6 bits (56), Expect = 8.7 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 208 YRDKLMTVAIDADEDEHQRILEFF--GMKKEEVPAARLIALEQDMAKYKPTTDELSAN 375 YR K M I + + QR + F G+ EV A + L Q Y P DEL+++ Sbjct: 394 YRWKRMPFGISSAPEVFQRKMHEFAEGLTGTEVVADDFLYLSQFRKGYTPDIDELTSH 451 >SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 26.6 bits (56), Expect = 8.7 Identities = 14/54 (25%), Positives = 28/54 (51%) Frame = +1 Query: 139 LFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEV 300 L L + + E+ +EE+K K +D++M + ++ +++L K EEV Sbjct: 267 LSLIQNSQETEEALEEMKQTIKQTQDRMMFSYGEFKAEDQEKMLAALNKKVEEV 320 >SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 6406 Score = 26.6 bits (56), Expect = 8.7 Identities = 14/51 (27%), Positives = 29/51 (56%) Frame = +1 Query: 121 IKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILE 273 I+Y++L ++KK F+K +E+ + +A+ ++DEH+ IL+ Sbjct: 1095 IQYYILATIAKKQPVFDKLMEDGRDMAERMEP-------GEEKDEHEAILK 1138 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,654,212 Number of Sequences: 59808 Number of extensions: 222017 Number of successful extensions: 772 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 738 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 771 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 822495283 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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