SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M08
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfi...   138   2e-33
U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfi...   135   1e-32
Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical pr...    87   4e-18
U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulph...    87   4e-18
U41542-7|ABO16445.1|  371|Caenorhabditis elegans Protein disulfi...    73   9e-14
U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical pr...    32   0.20 
Z50872-2|CAA90755.1|  273|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical...    27   4.4  
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical...    27   4.4  
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ...    27   4.4  
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical...    27   4.4  
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical...    27   4.4  
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ...    27   4.4  
AF098986-4|AAY86227.1|  129|Caenorhabditis elegans Hypothetical ...    27   4.4  
Z82284-5|CAB05291.1|  418|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AL110499-4|CAD30454.1|  197|Caenorhabditis elegans Hypothetical ...    27   7.7  

>U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform a protein.
          Length = 493

 Score =  138 bits (334), Expect = 2e-33
 Identities = 65/146 (44%), Positives = 101/146 (69%), Gaps = 5/146 (3%)
 Frame = +1

Query: 10  DGE-AFDEDL----FKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEK 174
           DG  AFDE L     K+W+    + ++ EF+ ETAS IFGG+IK H LLF+SK++  F K
Sbjct: 207 DGRVAFDEKLTQDGLKTWIQANRLALVSEFTQETASVIFGGEIKSHNLLFVSKESSEFAK 266

Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPT 354
             +E K  AK ++ K++ V I+ D +E+ RI+EFFG+KK+E+PA RLI+LE+DM K+KP 
Sbjct: 267 LEQEFKNAAKQFKGKVLFVYINTDVEENARIMEFFGLKKDELPAIRLISLEEDMTKFKPD 326

Query: 355 TDELSANAVEEFVQSFFAGTLETHLL 432
            +E++   + +F Q++  G+++ HL+
Sbjct: 327 FEEITTENISKFTQNYLDGSVKPHLM 352


>U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform b protein.
          Length = 437

 Score =  135 bits (326), Expect = 1e-32
 Identities = 58/131 (44%), Positives = 94/131 (71%)
 Frame = +1

Query: 40  KSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDK 219
           K+W+    + ++ EF+ ETAS IFGG+IK H LLF+SK++  F K  +E K  AK ++ K
Sbjct: 166 KTWIQANRLALVSEFTQETASVIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGK 225

Query: 220 LMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
           ++ V I+ D +E+ RI+EFFG+KK+E+PA RLI+LE+DM K+KP  +E++   + +F Q+
Sbjct: 226 VLFVYINTDVEENARIMEFFGLKKDELPAIRLISLEEDMTKFKPDFEEITTENISKFTQN 285

Query: 400 FFAGTLETHLL 432
           +  G+++ HL+
Sbjct: 286 YLDGSVKPHLM 296


>Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical
           protein C14B1.1 protein.
          Length = 485

 Score = 87.4 bits (207), Expect = 4e-18
 Identities = 41/124 (33%), Positives = 68/124 (54%)
 Frame = +1

Query: 40  KSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDK 219
           K W+    +  + EF+HE+A +I GG +K    L + K   +F++ + +   VAK +R K
Sbjct: 226 KQWLHAYKLSAVTEFTHESAQEIVGGDLKKFHFLIIRKSDSSFDETIAKFTEVAKKFRAK 285

Query: 220 LMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
           ++ V +D D +E+ RILEF G+  +  PA R+++L   + K+KP   E      E F  S
Sbjct: 286 IVFVLLDVDVEENARILEFLGVDAKNTPANRIVSLADQVEKFKPQEGE----DFEAFTNS 341

Query: 400 FFAG 411
           +  G
Sbjct: 342 YLEG 345


>U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulphide
           isomerase isoformI protein.
          Length = 485

 Score = 87.4 bits (207), Expect = 4e-18
 Identities = 41/124 (33%), Positives = 68/124 (54%)
 Frame = +1

Query: 40  KSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDK 219
           K W+    +  + EF+HE+A +I GG +K    L + K   +F++ + +   VAK +R K
Sbjct: 226 KQWLHAYKLSAVTEFTHESAQEIVGGDLKKFHFLIIRKSDSSFDETIAKFTEVAKKFRAK 285

Query: 220 LMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
           ++ V +D D +E+ RILEF G+  +  PA R+++L   + K+KP   E      E F  S
Sbjct: 286 IVFVLLDVDVEENARILEFLGVDAKNTPANRIVSLADQVEKFKPQEGE----DFEAFTNS 341

Query: 400 FFAG 411
           +  G
Sbjct: 342 YLEG 345


>U41542-7|ABO16445.1|  371|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform c protein.
          Length = 371

 Score = 72.9 bits (171), Expect = 9e-14
 Identities = 28/61 (45%), Positives = 48/61 (78%)
 Frame = +1

Query: 250 DEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLETHL 429
           +E+ RI+EFFG+KK+E+PA RLI+LE+DM K+KP  +E++   + +F Q++  G+++ HL
Sbjct: 170 EENARIMEFFGLKKDELPAIRLISLEEDMTKFKPDFEEITTENISKFTQNYLDGSVKPHL 229

Query: 430 L 432
           +
Sbjct: 230 M 230


>U40948-5|AAA81731.2|  955|Caenorhabditis elegans Hypothetical
           protein F55D10.1 protein.
          Length = 955

 Score = 31.9 bits (69), Expect = 0.20
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = +1

Query: 130 HLLLFLSKKADTFEKYVEELKPVA-KNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPA 306
           H++LF   KA T      +L+P+A  N+   ++    + ++ E  R+LE+ G+K E    
Sbjct: 811 HIVLFTDVKAST-----SQLRPLAIDNFHQPVLAFNKNPEKFEFNRLLEYSGLKFELPIG 865

Query: 307 ARLIALEQ 330
             L+ LE+
Sbjct: 866 IHLLTLEK 873


>Z50872-2|CAA90755.1|  273|Caenorhabditis elegans Hypothetical
           protein C05D12.4 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 160 DTFEKYVEELKPVAKNYRDKLMTVAIDADE--DEHQRILEFFGMKKEEVPAA 309
           D F++ VEE   V KN ++ +  + I   E  +EH+ +++    K ++   A
Sbjct: 116 DAFDEKVEENNEVIKNQKESIDKMRISRTETSEEHKELVKKINQKMKDTETA 167


>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
           protein F31C3.3 protein.
          Length = 2029

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = +1

Query: 169 EKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFG-MKKEEV--PAARLIALEQDMA 339
           +K   E  P+  + R + + V ++ ++DE +  L+    +K++EV     R   LE+ + 
Sbjct: 698 KKEFTEASPLPSDVRIEFLEVWLELEDDEFENRLKLSAQLKEDEVYESERREQLLEERLF 757

Query: 340 KYKPTTDELSANAVEEFVQSFFAGTLETHL 429
             K T   LS   +E    S      E ++
Sbjct: 758 NLKKTAPFLSKEMIEAIKNSLIEKNSEIYI 787


>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6c protein.
          Length = 1245

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 220 LMTVAIDADE-DEH-QRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
           ++ VA++  E +EH   +L+ F      VPA   +  E+D+ +Y  T  E  AN  EE V
Sbjct: 73  VLAVAVEEKEIEEHWNHVLQHF------VPAIEPLQFEKDVRRYVTTKVESLANNSEEVV 126

Query: 394 QSF 402
             +
Sbjct: 127 SPY 129


>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6a protein.
          Length = 1247

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 220 LMTVAIDADE-DEH-QRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
           ++ VA++  E +EH   +L+ F      VPA   +  E+D+ +Y  T  E  AN  EE V
Sbjct: 73  VLAVAVEEKEIEEHWNHVLQHF------VPAIEPLQFEKDVRRYVTTKVESLANNSEEVV 126

Query: 394 QSF 402
             +
Sbjct: 127 SPY 129


>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6b protein.
          Length = 1245

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 220 LMTVAIDADE-DEH-QRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
           ++ VA++  E +EH   +L+ F      VPA   +  E+D+ +Y  T  E  AN  EE V
Sbjct: 73  VLAVAVEEKEIEEHWNHVLQHF------VPAIEPLQFEKDVRRYVTTKVESLANNSEEVV 126

Query: 394 QSF 402
             +
Sbjct: 127 SPY 129


>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6c protein.
          Length = 1245

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 220 LMTVAIDADE-DEH-QRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
           ++ VA++  E +EH   +L+ F      VPA   +  E+D+ +Y  T  E  AN  EE V
Sbjct: 73  VLAVAVEEKEIEEHWNHVLQHF------VPAIEPLQFEKDVRRYVTTKVESLANNSEEVV 126

Query: 394 QSF 402
             +
Sbjct: 127 SPY 129


>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6a protein.
          Length = 1247

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 220 LMTVAIDADE-DEH-QRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
           ++ VA++  E +EH   +L+ F      VPA   +  E+D+ +Y  T  E  AN  EE V
Sbjct: 73  VLAVAVEEKEIEEHWNHVLQHF------VPAIEPLQFEKDVRRYVTTKVESLANNSEEVV 126

Query: 394 QSF 402
             +
Sbjct: 127 SPY 129


>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
           protein Y45F10A.6b protein.
          Length = 1245

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 220 LMTVAIDADE-DEH-QRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
           ++ VA++  E +EH   +L+ F      VPA   +  E+D+ +Y  T  E  AN  EE V
Sbjct: 73  VLAVAVEEKEIEEHWNHVLQHF------VPAIEPLQFEKDVRRYVTTKVESLANNSEEVV 126

Query: 394 QSF 402
             +
Sbjct: 127 SPY 129


>AF098986-4|AAY86227.1|  129|Caenorhabditis elegans Hypothetical
           protein C36C9.6 protein.
          Length = 129

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -2

Query: 219 LVAVVLSDWFQFFYILFKCVSFLRQEQKEMI 127
           ++++ LSDW   F+ L  C SF +   KE++
Sbjct: 11  IISLTLSDWNHCFFGLRFCPSFTKHLVKELV 41


>Z82284-5|CAB05291.1|  418|Caenorhabditis elegans Hypothetical
           protein T27E7.6 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +1

Query: 145 LSKKADTFEKYVEELKPVAKNYRDK 219
           + +++D  EKY  E+  +AKN++++
Sbjct: 184 MKERSDELEKYTREMNEMAKNHQEE 208


>AL110499-4|CAD30454.1|  197|Caenorhabditis elegans Hypothetical
           protein Y62F5A.9 protein.
          Length = 197

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 27/77 (35%), Positives = 41/77 (53%)
 Frame = +1

Query: 76  VEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDE 255
           VE SH  + KI G  I+  + L +   ADT    ++E K + +  +D    V+ D DED+
Sbjct: 21  VETSHPASDKIIGKYIELSMNLTILL-ADTA---IDEAK-IHQLSKDM---VSNDYDEDK 72

Query: 256 HQRILEFFGMKKEEVPA 306
            QR+L+ F    E +PA
Sbjct: 73  VQRVLDKF---MESLPA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,375,872
Number of Sequences: 27780
Number of extensions: 173771
Number of successful extensions: 659
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -