Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M08
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   2.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   2.6  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   3.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   3.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   4.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   7.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 168 KCVSFLRQEQKEMIFDLSTEDLRCGLMGELNDD 70
           KC      E K+ + D+  +D++  L   +NDD
Sbjct: 283 KCSMITTPEIKKEVEDMEYDDIKTELSTGMNDD 315


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 280 GMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
           GMK+E V   R    E+D ++ + T+   S   +E  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 280 GMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 399
           GMK+E V   R    E+D ++ + T+   S   +E  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 210 VVLSDWFQFFYILFKCVSFLRQEQKE 133
           V +  W QF Y L    SF ++ Q+E
Sbjct: 421 VWIPKWRQFLYCLAGDESFRKRRQRE 446


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 323 SNKTWLSTNRPPMSLALTLLRNSCNRSSLELLKH 424
           SN T + + +PP      L R++ +   L +LKH
Sbjct: 626 SNTTSMESFKPPTLTESLLNRHNEDMEKLMMLKH 659


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 317 SLSNKTWLSTNRPPMSLAL 373
           S +NKTWL  N    SL L
Sbjct: 437 SQTNKTWLPVNENYKSLNL 455


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 197 TGFSSSTYFSNVSAFLDRNR 138
           +GF S+  +SN   F  RNR
Sbjct: 295 SGFYSTIMYSNGVTFPQRNR 314


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 197 TGFSSSTYFSNVSAFLDRNR 138
           +GF S+  +SN   F  RNR
Sbjct: 295 SGFYSTIMYSNGVTFPQRNR 314


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 151 KKADTFEKYVEELKPVAKNY 210
           +KAD    Y+    PV KN+
Sbjct: 437 RKADPNGDYIRRYLPVLKNF 456


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 229 VAIDADEDEHQRILEFFGMKKEEVPAAR 312
           VAI    D   R LE FG+  +   A R
Sbjct: 370 VAISYIHDPDHRYLESFGVMGDSATAMR 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,741
Number of Sequences: 438
Number of extensions: 1796
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)