Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M08
(433 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 64 4e-11
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 59 1e-09
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 59 1e-09
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 48 3e-06
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 39 0.001
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 39 0.001
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 38 0.004
At1g52220.1 68414.m05892 expressed protein 31 0.44
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 25 1.3
At3g19190.1 68416.m02436 expressed protein 29 1.4
At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containi... 28 2.4
At4g21120.1 68417.m03054 amino acid permease family protein simi... 28 2.4
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 3.1
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 4.1
At4g27595.1 68417.m03964 protein transport protein-related low s... 27 5.5
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 27 5.5
At4g35990.1 68417.m05125 hypothetical protein 27 7.2
At2g45900.1 68415.m05708 expressed protein 27 7.2
At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containi... 27 7.2
At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing pro... 27 7.2
At3g59040.2 68416.m06580 pentatricopeptide (PPR) repeat-containi... 26 9.6
At3g59040.1 68416.m06581 pentatricopeptide (PPR) repeat-containi... 26 9.6
At3g46980.2 68416.m05102 transporter-related low similarity to b... 26 9.6
At3g46980.1 68416.m05101 transporter-related low similarity to b... 26 9.6
At2g34920.1 68415.m04287 ubiquitin-protein ligase-related contai... 26 9.6
At2g30575.1 68415.m03725 glycosyl transferase family 8 protein c... 26 9.6
At1g75890.1 68414.m08815 family II extracellular lipase 2 (EXL2)... 26 9.6
At1g13220.2 68414.m01534 nuclear matrix constituent protein-rela... 26 9.6
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 64.1 bits (149), Expect = 4e-11
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +1
Query: 4 KYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVE 183
++DG F + +V +P+++ F+ E AS IF +K L+LF KA+ EK++
Sbjct: 289 RFDGN-FTKTAIAEFVSANKVPLVINFTREGASLIFESSVKNQLILFA--KANESEKHLP 345
Query: 184 ELKPVAKNYRDKLMTVAIDAD-EDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTD 360
L+ VAK+++ K + V + D ED + + FFG+ P + +DM K+
Sbjct: 346 TLREVAKSFKGKFVFVYVQMDNEDYGEAVSGFFGV-TGAAPKVLVYTGNEDMRKF-ILDG 403
Query: 361 ELSANAVEEFVQSFFAGTLE 420
EL+ N ++ + F A L+
Sbjct: 404 ELTVNNIKTLAEDFLADKLK 423
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 59.3 bits (137), Expect = 1e-09
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186
+DGE F + S+V + ++ F+ ETA +IF IK LLLF++K EK + E
Sbjct: 294 FDGE-FVKSALVSFVSANKLALVSVFTRETAPEIFESAIKKQLLLFVTKNES--EKVLTE 350
Query: 187 LKPVAKNYRDKLMTVAIDAD-EDEHQRILEFFGM 285
+ AK+++ KL+ V++D D ED + + E+FG+
Sbjct: 351 FQEAAKSFKGKLIFVSVDLDNEDYGKPVAEYFGV 384
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 59.3 bits (137), Expect = 1e-09
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186
+DGE F + S+V + ++ F+ ETA +IF IK LLLF++K EK + E
Sbjct: 294 FDGE-FVKSALVSFVSANKLALVSVFTRETAPEIFESAIKKQLLLFVTKNES--EKVLTE 350
Query: 187 LKPVAKNYRDKLMTVAIDAD-EDEHQRILEFFGM 285
+ AK+++ KL+ V++D D ED + + E+FG+
Sbjct: 351 FQEAAKSFKGKLIFVSVDLDNEDYGKPVAEYFGV 384
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 48.0 bits (109), Expect = 3e-06
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = +1
Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186
YDG E + + ++ P+ + + ++ +K ++LF KAD F+K +
Sbjct: 270 YDGSYKMEKILE-FLGSNKFPLFTKLTETNTVWVYSSPVKLQVMLF--SKADDFQKLAQP 326
Query: 187 LKPVAKNYRDKLMTVAID-ADEDEHQRILEFFGMKKEEVPAARLIALEQDM-AKYKPTTD 360
L+ +A+ ++ KLM + +D +E+ L FG+ E + A + ++ +KY +D
Sbjct: 327 LEDIARKFKSKLMFIYVDITNENLAMPFLILFGI--EAGNKTVVAAFDNNLNSKYLLESD 384
Query: 361 ELSANAVEEFVQSFFAGTLETH 426
S N++EEF GT+ +
Sbjct: 385 P-SPNSIEEFCSGLAHGTVSRY 405
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 39.1 bits (87), Expect = 0.001
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 10 DGEAFDEDLFKSWVFVQSMPVIVEF-----SHETASKIFGGQIKYHLLLFLSKKADTFEK 174
D + FD + + +V S+P+I F +H K F +LF++ + E
Sbjct: 225 DSKDFDGEALEKFVKESSIPLITVFDKDPNNHPYVIKFFEST-NTKAMLFINFTGEGAES 283
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPT 354
+ + VA + + + ++ + D + Q ++FG+++ +VP +I D KY T
Sbjct: 284 LKSKYREVATSNKGQGLSFLL-GDAENSQGAFQYFGLEESQVPL--IIIQTADDKKYLKT 340
Query: 355 TDELSANAVEEFVQSFFAGTLETH 426
E+ + +E +V+ F G + H
Sbjct: 341 NVEV--DQIESWVKDFKDGKIAPH 362
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 39.1 bits (87), Expect = 0.001
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 10 DGEAFDEDLFKSWVFVQSMPVIVEF-----SHETASKIFGGQIKYHLLLFLSKKADTFEK 174
D + FD + + +V S+P+I F +H K F +LF++ + E
Sbjct: 225 DSKDFDGEALEKFVKESSIPLITVFDKDPNNHPYVIKFFEST-NTKAMLFINFTGEGAES 283
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPT 354
+ + VA + + + ++ + D + Q ++FG+++ +VP +I D KY T
Sbjct: 284 LKSKYREVATSNKGQGLSFLL-GDAENSQGAFQYFGLEESQVPL--IIIQTADDKKYLKT 340
Query: 355 TDELSANAVEEFVQSFFAGTLETH 426
E+ + +E +V+ F G + H
Sbjct: 341 NVEV--DQIESWVKDFKDGKIAPH 362
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 37.5 bits (83), Expect = 0.004
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 10 DGEAFDEDLFKSWVFVQSMPVIVEF-----SHETASKIFGGQIKYHLLLFLSKKADTFEK 174
D + F+ + + +V S+P++ F +H +K F ++F++ T E
Sbjct: 223 DSKDFNGEALEKFVKESSIPLVTVFDSDPNNHPYVAKFFESPAT-KAMMFVNFTGATAEA 281
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPT 354
+ + VA + +D+ + + D + Q ++FG+++ +VP +I D KY
Sbjct: 282 LKSKYREVATSNKDQSLAFLV-GDAESSQGAFQYFGLEESQVPL--IIIQTPDNKKYLKV 338
Query: 355 TDELSANAVEEFVQSFFAGTLETH 426
E+ + +E + + F G + H
Sbjct: 339 NVEV--DQIESWFKDFQDGKVAVH 360
>At1g52220.1 68414.m05892 expressed protein
Length = 156
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 240 VNGDGHELVAVVLSDWFQFFYILFK 166
V G ELV ++ S WF + Y+LFK
Sbjct: 112 VISSGFELVGILFSTWFTYRYLLFK 136
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 25.4 bits (53), Expect(2) = 1.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 151 KKADTFEKYVEELKPVAKNYRD 216
+KA +KY E L+ KNYRD
Sbjct: 269 RKAVRKKKYEESLREARKNYRD 290
Score = 22.2 bits (45), Expect(2) = 1.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 202 KNYRDKLMTVAIDADEDEHQRILE 273
K+Y D+L +ADE + R LE
Sbjct: 329 KDYEDRLKIEKAEADERKKMRELE 352
>At3g19190.1 68416.m02436 expressed protein
Length = 1861
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 144 EQKEMIFDLSTEDLRCGLMGELNDDGHALDEHP*FEQVLVEC 19
E K + + E GLM E+N+D D +P ++ VEC
Sbjct: 1250 EMKYLRLESENETGVIGLMDEINEDAFQFDVNPTYQSDSVEC 1291
>At4g30480.2 68417.m04328 tetratricopeptide repeat (TPR)-containing
protein similar to SP|Q99614 Tetratricopeptide repeat
protein 1 {Homo sapiens}; contains Pfam profile PF00515:
TPR Domain
Length = 277
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 136 LLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAAR 312
+L L D K + L+P+A R+K+ AI ++ IL FGM + A +
Sbjct: 206 ILELDPSNDQARKGIRRLEPLAAEKREKMKEEAITKLKEMGNSILGRFGMSVDNFKAVK 264
>At4g21120.1 68417.m03054 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 594
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKK 291
Y++ LK + D++MT ++D+DE + MKK
Sbjct: 34 YLKALKETPSRFMDRIMTRSLDSDEINEMKARSGHEMKK 72
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar to
COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +1
Query: 169 EKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYK 348
+K ++ V++N +++ E+E + +LE +EE + +E+D+
Sbjct: 788 QKQNTDIDDVSENLKNEAFDDTESEAEEEEKEVLENPVKGEEEAREMETLVVEEDIGDET 847
Query: 349 PTTDELSANAVE 384
P+ E+ N+ E
Sbjct: 848 PSLTEIVENSSE 859
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 88 HETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAI 237
HE+A +F + + ++L +SK A +F Y E++KP+ K +D +M V I
Sbjct: 653 HESALSLFKYTM-FWVVLLISKLAFSF--YAEQIKPLVKPTKD-IMRVHI 698
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEE 297
L +K ++K +EEL V + + D+ + E+E R E +KK E
Sbjct: 787 LREKESAYQKKIEELSKVDEIFADREAKLQSSTQENEELREREVAYLKKIE 837
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +1
Query: 22 FDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVA 201
F++ + +V +P+I+ +H+T + + K L + + ++ EK + L+ A
Sbjct: 227 FEDGFLEEFVKQSFLPLILPINHDTLKLLKDDERKIVLTIVEDETHESLEKLYKALRAAA 286
Query: 202 KNYRD 216
RD
Sbjct: 287 HANRD 291
>At4g35990.1 68417.m05125 hypothetical protein
Length = 129
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 136 LLFLSKKADTFEKYVEELKPVAKNY 210
L F K+ D+ EK+++E+K + +Y
Sbjct: 62 LFFSPKRGDSLEKFMKEIKDIGLHY 86
>At2g45900.1 68415.m05708 expressed protein
Length = 720
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 244 DEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFF 405
DEDEH+++LE +K+ + P + + + + TTD L ++ ++ FF
Sbjct: 453 DEDEHKQLLEKEVLKEGQSPCSPPNSSVRMSECQENTTDVLGKSSPVSVLEPFF 506
>At2g41720.1 68415.m05157 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 226 TVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQD 333
+V+++ D EH+ + G++K ++P I +E D
Sbjct: 35 SVSVNYDRGEHEVSVNIGGLRKADIPRRYRIRVEND 70
>At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein similar to SP|Q01780 Polymyositis/scleroderma
autoantigen 2 {Homo sapiens}; contains Pfam profiles
PF00570: HRDC domain, PF01612: 3'-5' exonuclease
Length = 738
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 136 LLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILE 273
+L +K ++ K EE+K V+K+ DK++ V D D+D+ E
Sbjct: 623 VLLSKRKFESDNKVKEEVK-VSKSKPDKVIIVVDDDDDDDDDESYE 667
>At3g59040.2 68416.m06580 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 590
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 52 FVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEK 174
F ++ V E S + Q YH+++++ KKA +EK
Sbjct: 232 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 272
>At3g59040.1 68416.m06581 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 583
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 52 FVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEK 174
F ++ V E S + Q YH+++++ KKA +EK
Sbjct: 225 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 265
>At3g46980.2 68416.m05102 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 469
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = -3
Query: 149 DRNRRR*YLICPPKILDAVSWENSTMTGMLWTNTHDLNKSSSNA 18
+R+RRR ++C ++++++ + +T + H L S S+A
Sbjct: 43 ERDRRRKLVLCTGRVVNSLKFTGNTSVDLCGIPRHRLRVSCSDA 86
>At3g46980.1 68416.m05101 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 533
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = -3
Query: 149 DRNRRR*YLICPPKILDAVSWENSTMTGMLWTNTHDLNKSSSNA 18
+R+RRR ++C ++++++ + +T + H L S S+A
Sbjct: 43 ERDRRRKLVLCTGRVVNSLKFTGNTSVDLCGIPRHRLRVSCSDA 86
>At2g34920.1 68415.m04287 ubiquitin-protein ligase-related contains
weak similarity to Ubiquitin-protein ligase E3 Mdm2 (EC
6.3.2.-) (p53-binding protein Mdm2) (Oncoprotein Mdm2)
(Double minute 2 protein) (Swiss-Prot:P23804) [Mus
musculus]
Length = 785
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 255 TPENPRVLRHEE-GRSSSGKTDRSRT 329
TP+ PR+LR+EE G+ SG T
Sbjct: 510 TPQEPRILRNEEAGKLESGTEGTQET 535
>At2g30575.1 68415.m03725 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 610
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 172 KYVEELKPVAKNYRDKLMTVAIDADED---EHQRILE 273
+++EEL + D+L AI+ DE+ E +RIL+
Sbjct: 41 EFIEELSDITDKTEDELRLTAIEQDEEGLKEPKRILQ 77
>At1g75890.1 68414.m08815 family II extracellular lipase 2 (EXL2)
EXL2 (PMID:11431566); similar to anter-specific
proline-rich protein (APG) SP:P40602 [Arabidopsis
thaliana]
Length = 379
Score = 26.2 bits (55), Expect = 9.6
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 28 EDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLL--LFLSKKADTFEKYVEELKPVA 201
EDL F V F+ + ++ +F + L + LS++ FE+YVE++K +
Sbjct: 120 EDLLTGVTFASGGAGYVPFTTQLSTYLFIYKPLLFLKGGIALSQQLKLFEEYVEKMKKMV 179
Query: 202 KNYRDKLM 225
R KL+
Sbjct: 180 GEERTKLI 187
>At1g13220.2 68414.m01534 nuclear matrix constituent protein-related
similar to nuclear matrix constituent protein 1 (NMCP1)
[Daucus carota] GI:2190187
Length = 1128
Score = 26.2 bits (55), Expect = 9.6
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +1
Query: 145 LSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL 324
L ++ + FEK E L Y + + ++ + ++ E ++LE +KKEE +A + +
Sbjct: 547 LKQEKERFEKEWEILDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEE--SALRVQI 604
Query: 325 EQDMAKYKPTTDELSANAVEE 387
Q++ + + AN E
Sbjct: 605 MQELDDIRLQRESFEANMEHE 625
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,908,744
Number of Sequences: 28952
Number of extensions: 162123
Number of successful extensions: 568
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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