SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M07
         (500 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851,666...   122   2e-28
04_04_1078 - 30655212-30655289,30655614-30655811,30655916-306560...   120   7e-28
02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237...    73   2e-13
01_06_0881 + 32692345-32692497,32693167-32693286,32693382-326934...    61   4e-10
08_01_0637 + 5537421-5539547                                           28   4.8  
05_03_0356 + 12894195-12894237,12894347-12894484,12894868-128950...    28   4.8  
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204...    28   4.8  
07_01_0592 + 4409644-4410084                                           27   6.4  
06_03_0923 - 25972063-25972840,25973549-25973620,25973711-259737...    27   6.4  
04_03_0278 - 13761999-13762462,13762628-13762727,13763065-137632...    27   6.4  
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081...    27   8.5  
09_06_0291 - 22066550-22067610,22067721-22067975,22068093-220682...    27   8.5  
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866...    27   8.5  
08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864...    27   8.5  
06_03_0417 + 20576716-20576742,20578110-20578345,20578347-205786...    27   8.5  
05_04_0112 + 18084490-18084915                                         27   8.5  
04_04_1113 - 30986757-30986780,30986781-30987273,30987437-309879...    27   8.5  
03_02_0134 + 5820068-5820178,5822439-5822508,5822893-5822939,582...    27   8.5  
01_06_0265 - 28011181-28011240,28011298-28011375,28011493-280118...    27   8.5  
01_01_0591 - 4401847-4402063,4402860-4403002,4403339-4403447,440...    27   8.5  

>05_02_0107 -
           6667944-6668214,6668376-6668524,6668654-6668851,
           6668989-6669250,6669378-6670327,6670907-6671022,
           6671121-6671280
          Length = 701

 Score =  122 bits (293), Expect = 2e-28
 Identities = 53/95 (55%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   ETFESYFIMWRLTKQQRYRDWGWEAVQALEKHCRVD-GGYTGIANVYHQNPQGDDVQQSF 179
           ET ES F+++R+T+  +YR+WGW+  QA EK+ RVD GGYT + +V    P   D  ++F
Sbjct: 596 ETVESLFVLYRITEDPKYREWGWQIFQAFEKYTRVDSGGYTSLDDVTSLPPPRRDKMETF 655

Query: 180 FLAETLKYLYLLFSDDTLVPLDEWVFNTEAHPLPI 284
           FL ETLKYLYLLF +  ++PLD++VFNTEAHPLPI
Sbjct: 656 FLGETLKYLYLLFGESNILPLDKYVFNTEAHPLPI 690


>04_04_1078 -
           30655212-30655289,30655614-30655811,30655916-30656086,
           30656172-30656252,30656464-30656565,30656671-30656779,
           30656900-30656965,30657566-30657630,30658386-30658475,
           30658952-30659123,30659831-30659943,30660046-30660219,
           30660300-30660347,30662041-30662205
          Length = 543

 Score =  120 bits (289), Expect = 7e-28
 Identities = 53/94 (56%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   ETFESYFIMWRLTKQQRYRDWGWEAVQALEKHCRVDGGYTGIANVYHQNPQGDDVQQSFF 182
           ET ES   +WRLT  + Y+DWGW+  QA EK+ R++ GY G+ +V     + D++ QSFF
Sbjct: 409 ETVESLMYLWRLTGNKTYQDWGWDIFQAFEKNSRIESGYVGLRDV--NTGEKDNMMQSFF 466

Query: 183 LAETLKYLYLLFSDDTLVPLDEWVFNTEAHPLPI 284
           LAETLKYLYLLFS  +++  DEWVFNTEAHPL I
Sbjct: 467 LAETLKYLYLLFSPPSVISFDEWVFNTEAHPLRI 500


>02_05_0701 +
           31022485-31022648,31023569-31023611,31023712-31023777,
           31024007-31024062,31024091-31024190,31024290-31024472,
           31024953-31025001,31025089-31025169,31025209-31025268,
           31025394-31025514,31025612-31025693,31025783-31025868,
           31026011-31026111,31026246-31026387,31026488-31026638,
           31026710-31026937
          Length = 570

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 37/95 (38%), Positives = 58/95 (61%)
 Frame = +3

Query: 3   ETFESYFIMWRLTKQQRYRDWGWEAVQALEKHCRVDGGYTGIANVYHQNPQGDDVQQSFF 182
           E  ES F +++ TK   Y + G   + +L  + +VDGG+  + +V     + +D Q SFF
Sbjct: 384 EFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDV--STMKLEDHQHSFF 441

Query: 183 LAETLKYLYLLFSDDTLVPLDEWVFNTEAHPLPIK 287
           L+ET KYL+LL+ DD+ +    ++F TE HPLPI+
Sbjct: 442 LSETCKYLFLLY-DDSFLRNQNYIFTTEGHPLPIR 475


>01_06_0881 +
           32692345-32692497,32693167-32693286,32693382-32693474,
           32694197-32694283,32696052-32696063,32696553-32696625,
           32697073-32697182,32697608-32697658,32698154-32698242,
           32698518-32698599,32698680-32698793,32699015-32699094,
           32699749-32699884,32700210-32700280,32700363-32700457,
           32700467-32700597,32701009-32701398
          Length = 628

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
 Frame = +3

Query: 3   ETFESYFIMWRLTKQQRYRDWGWEAVQALEKHCRVDGGYTGIANVYHQNPQGDDVQQSFF 182
           E  ES + +++ T+  RY D G + + +L+   +   GY  I++V  +  Q DD  +SFF
Sbjct: 339 ELIESTYWLFKATRDYRYLDVGRDILASLQYGAKCPCGYCHISDV--ETHQQDDHMESFF 396

Query: 183 LAETLKYLYLLF----SDDTLVPLD--EWVFNTEAHPLPIKGQ 293
           LAET+KYL+LLF      D +V     +++F+TE H LP   Q
Sbjct: 397 LAETVKYLWLLFDLAAGPDNIVENGPYKYIFSTEGHLLPATPQ 439


>08_01_0637 + 5537421-5539547
          Length = 708

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 146 LMVDVCDTRVPAVHSTMLLQCLNSLPAPVAVA--LLF 42
           LM D+  T+V  +HS +   C++ LPA    A  LLF
Sbjct: 248 LMHDIFYTKVEVIHSNLYGLCIHMLPAMATTAAFLLF 284


>05_03_0356 +
           12894195-12894237,12894347-12894484,12894868-12895018,
           12895399-12895526,12895704-12895840,12896742-12896847,
           12898659-12898762,12899159-12899281,12899620-12899700,
           12900159-12900304,12902171-12902243,12902970-12903060,
           12904978-12905018,12906079-12906153,12906402-12906569,
           12907638-12907676,12907759-12907847,12908014-12908078,
           12908794-12908840,12908924-12908983,12909168-12909239,
           12910143-12910172,12910526-12910617,12910719-12910802,
           12911941-12912046,12912171-12912233,12912776-12912870,
           12913000-12913180
          Length = 875

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 421 EHIKLQSWSSLFSVEWXTRKVHSLF-SLSAELRTSFLSALRYS 296
           E  K + +  L S+EW T  +H+ +  + A L  SFLS L++S
Sbjct: 465 EPAKERDFDFLSSIEWLTSTIHTFYRDVHAHL-ISFLSDLKWS 506


>04_04_1694 -
           35419278-35419565,35419744-35419861,35420404-35420490,
           35420909-35420931,35421647-35421843,35421964-35422159,
           35422382-35422481,35423288-35423374,35424053-35424282,
           35424678-35424763,35425148-35425271,35425415-35428573,
           35430014-35430019
          Length = 1566

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = -3

Query: 162 HHLE-GSDG-RRLRYPCTRRPL----DNASPMPEQPPSPSRGSAAVWSDATL*NSS 13
           H LE G +G   L   CT+  L     + S   E P S S G   +WS ATL NS+
Sbjct: 577 HDLEDGHNGDTNLSTLCTQSQLYCAAGDTSQRTENPISESNGQRELWSGATLINSA 632


>07_01_0592 + 4409644-4410084
          Length = 146

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 231 GCRPRIGDIST*AFRQGRSSVERHHLEGSDGRRLRYPCTR 112
           GC PR+  +   A ++ R  V      G D  R   PC R
Sbjct: 27  GCEPRVVAVEEDAAQREREEVRAQEAAGVDDERGATPCRR 66


>06_03_0923 -
           25972063-25972840,25973549-25973620,25973711-25973747,
           25973852-25973910,25974011-25974295,25974653-25974954,
           25974986-25975116,25975209-25975296
          Length = 583

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +3

Query: 165 VQQSFFLAETLKYLYLLFSDDTLVPLDEWVFNTEAHPLPIKGQPLYRSADKKDVLNSADN 344
           V  +F L+ T   L+    D T V +DEWV + + H       P   +A   D L  +  
Sbjct: 310 VTATFILSGTFLLLHNAVGD-TCVAMDEWVLHPQGHTALDDILPCVDAAATSDALRRSKE 368

Query: 345 EN 350
            N
Sbjct: 369 VN 370


>04_03_0278 -
           13761999-13762462,13762628-13762727,13763065-13763289,
           13763347-13763415,13763605-13764432,13764706-13764779,
           13818821-13818905
          Length = 614

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 156 LEGSDGRRLRYPCTRRPLDNASPMPEQPPSPSR 58
           LE    RRL   C  RP   + P+P  PP PS+
Sbjct: 555 LEPLTNRRLTRRCRHRP--PSKPLPPPPPLPSK 585


>11_08_0092 -
           28307180-28307380,28307471-28307936,28308008-28308117,
           28308206-28308493,28309024-28309059
          Length = 366

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -3

Query: 159 HLEGSDGRRLRYPCTRRPLDNASPMPEQPPSPSRGSA 49
           H E  DG R       +P   A+P   QPPSPS   A
Sbjct: 191 HGEQPDGERDADEHRGQPHQRAAPRDVQPPSPSSSPA 227


>09_06_0291 -
           22066550-22067610,22067721-22067975,22068093-22068207,
           22068329-22068381,22068467-22068724,22069110-22069160,
           22069577-22069822,22070427-22070652,22070984-22071100
          Length = 793

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 125 TRVPAVHSTMLLQCLNSLP 69
           T +PA+HST++  C+  LP
Sbjct: 569 TNLPAIHSTLVFVCVKYLP 587


>09_04_0745 +
           19884868-19886000,19886110-19886309,19886422-19886666,
           19886880-19887668
          Length = 788

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -3

Query: 189 RQGRSSVERHHLEGSDGRRLRYPCTRRPLDNASPMPEQPPSP 64
           R GR    R        R L  P    PL+NA  +P  PP P
Sbjct: 22  RHGRRHYPRRWRSSGSRRELHEPLF--PLENAPALPPPPPPP 61


>08_02_0290 +
           15383473-15383669,15385057-15385267,15386389-15386440,
           15386545-15386863,15387022-15387121,15387391-15387657,
           15387780-15387857,15387943-15388032,15388119-15388168,
           15388267-15388366,15388777-15388875,15389023-15389136,
           15389238-15389412,15389726-15390132,15390565-15390639,
           15391412-15391438
          Length = 786

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 186 QGRSSVERHHLEGSDGRRLRYPCTRRPLD--NASPMPEQPPSPSRGSAAVWS 37
           +GRSS       GSD   L  P  RRP++    +P+ E+    +R SAA +S
Sbjct: 521 KGRSSDTSTVESGSDVDDLSSPMMRRPVECSRLAPVREEMQIRARDSAAYYS 572


>06_03_0417 +
           20576716-20576742,20578110-20578345,20578347-20578601,
           20578731-20579298
          Length = 361

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = -3

Query: 126 YPCTRRPLDNASPMPEQPPSP---SRGSAA 46
           YP +RRPL    P P + P P    RGS +
Sbjct: 189 YPYSRRPLFRPEPSPSREPRPLCKGRGSTS 218


>05_04_0112 + 18084490-18084915
          Length = 141

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 47  AALPRLGLGGCSGIGEAL 100
           A +PRL LGG  G+GE L
Sbjct: 3   AEIPRLALGGGGGVGEQL 20


>04_04_1113 -
           30986757-30986780,30986781-30987273,30987437-30987959,
           30988361-30988615,30988812-30988926,30989026-30989078,
           30989213-30989265,30989419-30989473,30989549-30989599,
           30989776-30990024,30990122-30990350,30990994-30991305
          Length = 803

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 119 VPAVHSTMLLQCLNSLPAPV 60
           +PA+HS ++  C+ ++P PV
Sbjct: 588 LPAIHSIIVFVCIRNVPVPV 607


>03_02_0134 +
           5820068-5820178,5822439-5822508,5822893-5822939,
           5823067-5823175,5823355-5823440,5823768-5823858,
           5824204-5824289,5824649-5824762
          Length = 237

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 2   GNVRE-LFHNVASDQTAALPRLGLGGCSGIGEALSSGRRV 118
           G++R  L  NV+ ++  ALP   +GGCS + E  ++G  +
Sbjct: 137 GDLRNMLLLNVSDNKLIALPE-SIGGCSSLEELQANGNSI 175


>01_06_0265 -
           28011181-28011240,28011298-28011375,28011493-28011802,
           28012913-28013533,28013733-28013818
          Length = 384

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 147 SDGRRLRYPCTRRPLDNASPMPEQPPSPSRGSAAVWSDA 31
           +D  RL        LD+  P+  + P PS  SAA WS A
Sbjct: 71  ADSSRLSSYLPSSQLDS-KPLRARAPQPSSSSAAAWSPA 108


>01_01_0591 -
           4401847-4402063,4402860-4403002,4403339-4403447,
           4403546-4404707,4405754-4405865,4405980-4406015
          Length = 592

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -3

Query: 138 RRLRYPCTRRPLDNASPMPEQPPSPSRGSAAVWSDAT 28
           RR R P + RP          PPSPSRG A   + AT
Sbjct: 150 RRARPPASSRPRYKCY---SHPPSPSRGDATAAAAAT 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,365,470
Number of Sequences: 37544
Number of extensions: 280965
Number of successful extensions: 1316
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -