Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M07
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.19 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.2  
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      21   7.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.5  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -3

Query: 495 SIL*LSVVLKTREVQSTLSLFVVELNT*NFRVGLHCLVWSGXQEKFTV 352
           ++L +  V  T ++++  ++F+V L   +  VGL  L +S   E F V
Sbjct: 83  NVLVILAVYHTSKLRNVTNMFIVSLAVADLMVGLAVLPFSATWEVFKV 130


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 393 HCLVWSGXQEKFTVCFHCL 337
           +CL W+  Q   T  FH L
Sbjct: 11  YCLRWNNYQSNMTSVFHQL 29


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 46  SSATATGAGRLFRHWRSIVEWTAGTRVS 129
           S    TG   LFR W SI+    G  ++
Sbjct: 295 SLVAITGGCFLFRAWESIIVGMIGAFIT 322


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 390 CLVWSGXQEKFTVCFHCLRS*E 325
           CL W+  Q   T  F  LR  E
Sbjct: 8   CLRWNNYQSSITSAFENLRDDE 29


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 390 CLVWSGXQEKFTVCFHCLRS*E 325
           CL W+  Q   T  F  LR  E
Sbjct: 8   CLRWNNYQSSITSAFENLRDDE 29


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 96  HCRVDGGYTGIANVYHQNP 152
           +C+ D    GI + Y +NP
Sbjct: 105 YCKCDDCLLGIVDDYQRNP 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,683
Number of Sequences: 438
Number of extensions: 3074
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)