Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M06
         (420 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   0.69 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.4  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 307 P*FNRKYTKYHLNSDTSRCP 248
           P     YT YHL S  + CP
Sbjct: 78  PMHQNSYTGYHLGSYAANCP 97


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +2

Query: 182 LTQYVCRLWV-GLVVSSAGACVTRTPACIAVQ---MIFCVLPIKLRLLFYILL 328
           +TQY    +V G +V    + V  T  C+      +IF + P+ + ++ YIL+
Sbjct: 208 ITQYGPEEYVDGSIVFVCFSLVEDTLPCVFFLGSILIFFIFPLAILIIVYILI 260


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 282 FVYFLLN*GYYFIYYCTYSYVVI 350
           F YF+     Y+IYY  +   +I
Sbjct: 147 FCYFIYLFTVYYIYYSVHEASII 169


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 145 SFFHRICNL 119
           SFF++ICN+
Sbjct: 15  SFFYKICNI 23


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 145 SFFHRICNL 119
           SFF++ICN+
Sbjct: 15  SFFYKICNI 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,553
Number of Sequences: 336
Number of extensions: 1648
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)