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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M06
         (420 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu...    30   0.73 
At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu...    29   0.97 
At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu...    29   0.97 
At2g23730.1 68415.m02833 expressed protein                             29   1.7  
At3g47390.1 68416.m05153 cytidine/deoxycytidylate deaminase fami...    28   3.0  
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m...    27   3.9  
At3g61500.1 68416.m06888 hypothetical protein                          27   3.9  
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem...    27   5.2  
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m...    27   5.2  
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem...    27   5.2  
At5g48070.1 68418.m05939 xyloglucan:xyloglucosyl transferase, pu...    27   6.8  

>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase,
           putative / xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative similar to
           xyloglucan endotransglycosylase TCH4 GI:886116 from
           [Arabidopsis thaliana]
          Length = 277

 Score = 29.9 bits (64), Expect = 0.73
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 213 PTHNLHTYCVKWN 175
           PT N HTYC+ WN
Sbjct: 137 PTANFHTYCITWN 149


>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase,
           putative / xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative similar to
           xyloglucan endotransglycosylase TCH4 GI:886116 from
           [Arabidopsis thaliana]
          Length = 282

 Score = 29.5 bits (63), Expect = 0.97
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 213 PTHNLHTYCVKWN 175
           PT N HTYC+ WN
Sbjct: 142 PTVNFHTYCITWN 154


>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase,
           putative / xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative similar to
           xyloglucan endotransglycosylase TCH4 GI:886116 from
           [Arabidopsis thaliana]
          Length = 282

 Score = 29.5 bits (63), Expect = 0.97
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 213 PTHNLHTYCVKWN 175
           PT N HTYC+ WN
Sbjct: 142 PTVNFHTYCITWN 154


>At2g23730.1 68415.m02833 expressed protein
          Length = 220

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -1

Query: 261 QAGVRVTHAPAELTT---KPTHNLHTYCV 184
           QAG+R   A   LTT   KPTH+   YCV
Sbjct: 81  QAGIRCAKADWPLTTLRGKPTHDRKKYCV 109


>At3g47390.1 68416.m05153 cytidine/deoxycytidylate deaminase family
           protein similar to riboflavin-specific deaminase
           [Actinobacillus pleuropneumoniae] GI:1173516; contains
           Pfam profile PF00383: Cytidine and deoxycytidylate
           deaminase zinc-binding region
          Length = 599

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 163 CLLIDRSFFHRICN-LPFEYLKY 98
           CLL++    HR C+ +PF  LKY
Sbjct: 170 CLLVNAPLIHRACSRVPFSVLKY 192


>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
           membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
           to SP|O81108 Calcium-transporting ATPase 2, plasma
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
           {Arabidopsis thaliana}
          Length = 1014

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
           +VQF LT  V    V LVV+ + AC+T +    AVQ+++
Sbjct: 813 FVQFQLTVNV----VALVVNFSSACLTGSAPLTAVQLLW 847


>At3g61500.1 68416.m06888 hypothetical protein
          Length = 279

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +2

Query: 74  KLHFLLAKILQILK-RQVTNPMKKTSVN*KAFYVQFHLTQYVCRLWVGLVVSSA 232
           K   +L + ++ L   +V N +K+  V  KAFY    LT Y+C ++V +V+S++
Sbjct: 98  KCREVLGRYVESLNFHKVKNCIKEAKVLMKAFYGANVLTAYICSVFV-IVLSNS 150


>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA11)
           identical to SP|Q9M2L4|ACAB_ARATH Potential
           calcium-transporting ATPase 11, plasma membrane-type (EC
           3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
           thaliana}; strong similarity to calmodulin-stimulated
           calcium-ATPase [Brassica oleracea] GI:1805654
          Length = 1025

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
           +VQF LT  V    V L+++   AC+T +    AVQ+++
Sbjct: 804 FVQFQLTVNV----VALIINFVSACITGSAPLTAVQLLW 838


>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
           membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
           to SP|O22218 Calcium-transporting ATPase 4, plasma
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
           {Arabidopsis thaliana}
          Length = 1030

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
           +VQF LT  V    V L+++   AC+T +    AVQ+++
Sbjct: 807 FVQFQLTVNV----VALIINFVSACITGSAPLTAVQLLW 841


>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
           membrane-type, putative / Ca2+-ATPase, putative (ACA7)
           identical to SP|O64806 Potential calcium-transporting
           ATPase 7, plasma  membrane-type (EC 3.6.3.8)
           (Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
           similarity to SP|O81108 Calcium-transporting ATPase 2,
           plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
           2) {Arabidopsis thaliana}
          Length = 1015

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
           +VQF LT  V    V L+V+ + AC+T +    AVQ+++
Sbjct: 814 FVQFQLTVNV----VALIVNFSSACLTGSAPLTAVQLLW 848


>At5g48070.1 68418.m05939 xyloglucan:xyloglucosyl transferase,
           putative / xyloglucan endotransglycosylase, putative /
           endo-xyloglucan transferase, putative similar to
           xyloglucan endotransglycosylase TCH4 GI:886116 from
           [Arabidopsis thaliana]
          Length = 282

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 213 PTHNLHTYCVKWN 175
           PT + HTYC+ WN
Sbjct: 142 PTVDFHTYCIIWN 154


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,927,224
Number of Sequences: 28952
Number of extensions: 114605
Number of successful extensions: 206
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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