Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M06
(420 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu... 30 0.73
At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu... 29 0.97
At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu... 29 0.97
At2g23730.1 68415.m02833 expressed protein 29 1.7
At3g47390.1 68416.m05153 cytidine/deoxycytidylate deaminase fami... 28 3.0
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 27 3.9
At3g61500.1 68416.m06888 hypothetical protein 27 3.9
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem... 27 5.2
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 27 5.2
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 27 5.2
At5g48070.1 68418.m05939 xyloglucan:xyloglucosyl transferase, pu... 27 6.8
>At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 277
Score = 29.9 bits (64), Expect = 0.73
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 213 PTHNLHTYCVKWN 175
PT N HTYC+ WN
Sbjct: 137 PTANFHTYCITWN 149
>At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 29.5 bits (63), Expect = 0.97
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 213 PTHNLHTYCVKWN 175
PT N HTYC+ WN
Sbjct: 142 PTVNFHTYCITWN 154
>At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 29.5 bits (63), Expect = 0.97
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 213 PTHNLHTYCVKWN 175
PT N HTYC+ WN
Sbjct: 142 PTVNFHTYCITWN 154
>At2g23730.1 68415.m02833 expressed protein
Length = 220
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -1
Query: 261 QAGVRVTHAPAELTT---KPTHNLHTYCV 184
QAG+R A LTT KPTH+ YCV
Sbjct: 81 QAGIRCAKADWPLTTLRGKPTHDRKKYCV 109
>At3g47390.1 68416.m05153 cytidine/deoxycytidylate deaminase family
protein similar to riboflavin-specific deaminase
[Actinobacillus pleuropneumoniae] GI:1173516; contains
Pfam profile PF00383: Cytidine and deoxycytidylate
deaminase zinc-binding region
Length = 599
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 163 CLLIDRSFFHRICN-LPFEYLKY 98
CLL++ HR C+ +PF LKY
Sbjct: 170 CLLVNAPLIHRACSRVPFSVLKY 192
>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
to SP|O81108 Calcium-transporting ATPase 2, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
{Arabidopsis thaliana}
Length = 1014
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
+VQF LT V V LVV+ + AC+T + AVQ+++
Sbjct: 813 FVQFQLTVNV----VALVVNFSSACLTGSAPLTAVQLLW 847
>At3g61500.1 68416.m06888 hypothetical protein
Length = 279
Score = 27.5 bits (58), Expect = 3.9
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 74 KLHFLLAKILQILK-RQVTNPMKKTSVN*KAFYVQFHLTQYVCRLWVGLVVSSA 232
K +L + ++ L +V N +K+ V KAFY LT Y+C ++V +V+S++
Sbjct: 98 KCREVLGRYVESLNFHKVKNCIKEAKVLMKAFYGANVLTAYICSVFV-IVLSNS 150
>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA11)
identical to SP|Q9M2L4|ACAB_ARATH Potential
calcium-transporting ATPase 11, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
thaliana}; strong similarity to calmodulin-stimulated
calcium-ATPase [Brassica oleracea] GI:1805654
Length = 1025
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
+VQF LT V V L+++ AC+T + AVQ+++
Sbjct: 804 FVQFQLTVNV----VALIINFVSACITGSAPLTAVQLLW 838
>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
to SP|O22218 Calcium-transporting ATPase 4, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
{Arabidopsis thaliana}
Length = 1030
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
+VQF LT V V L+++ AC+T + AVQ+++
Sbjct: 807 FVQFQLTVNV----VALIINFVSACITGSAPLTAVQLLW 841
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283
+VQF LT V V L+V+ + AC+T + AVQ+++
Sbjct: 814 FVQFQLTVNV----VALIVNFSSACLTGSAPLTAVQLLW 848
>At5g48070.1 68418.m05939 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 282
Score = 26.6 bits (56), Expect = 6.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 213 PTHNLHTYCVKWN 175
PT + HTYC+ WN
Sbjct: 142 PTVDFHTYCIIWN 154
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,927,224
Number of Sequences: 28952
Number of extensions: 114605
Number of successful extensions: 206
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 645327280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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