BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M06 (420 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, pu... 30 0.73 At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, pu... 29 0.97 At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, pu... 29 0.97 At2g23730.1 68415.m02833 expressed protein 29 1.7 At3g47390.1 68416.m05153 cytidine/deoxycytidylate deaminase fami... 28 3.0 At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 27 3.9 At3g61500.1 68416.m06888 hypothetical protein 27 3.9 At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem... 27 5.2 At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 27 5.2 At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 27 5.2 At5g48070.1 68418.m05939 xyloglucan:xyloglucosyl transferase, pu... 27 6.8 >At4g30290.1 68417.m04305 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] Length = 277 Score = 29.9 bits (64), Expect = 0.73 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 213 PTHNLHTYCVKWN 175 PT N HTYC+ WN Sbjct: 137 PTANFHTYCITWN 149 >At4g30280.1 68417.m04304 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] Length = 282 Score = 29.5 bits (63), Expect = 0.97 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 213 PTHNLHTYCVKWN 175 PT N HTYC+ WN Sbjct: 142 PTVNFHTYCITWN 154 >At1g65310.1 68414.m07406 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] Length = 282 Score = 29.5 bits (63), Expect = 0.97 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 213 PTHNLHTYCVKWN 175 PT N HTYC+ WN Sbjct: 142 PTVNFHTYCITWN 154 >At2g23730.1 68415.m02833 expressed protein Length = 220 Score = 28.7 bits (61), Expect = 1.7 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%) Frame = -1 Query: 261 QAGVRVTHAPAELTT---KPTHNLHTYCV 184 QAG+R A LTT KPTH+ YCV Sbjct: 81 QAGIRCAKADWPLTTLRGKPTHDRKKYCV 109 >At3g47390.1 68416.m05153 cytidine/deoxycytidylate deaminase family protein similar to riboflavin-specific deaminase [Actinobacillus pleuropneumoniae] GI:1173516; contains Pfam profile PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region Length = 599 Score = 27.9 bits (59), Expect = 3.0 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%) Frame = -3 Query: 163 CLLIDRSFFHRICN-LPFEYLKY 98 CLL++ HR C+ +PF LKY Sbjct: 170 CLLVNAPLIHRACSRVPFSVLKY 192 >At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical to SP|O81108 Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) {Arabidopsis thaliana} Length = 1014 Score = 27.5 bits (58), Expect = 3.9 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +2 Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283 +VQF LT V V LVV+ + AC+T + AVQ+++ Sbjct: 813 FVQFQLTVNV----VALVVNFSSACLTGSAPLTAVQLLW 847 >At3g61500.1 68416.m06888 hypothetical protein Length = 279 Score = 27.5 bits (58), Expect = 3.9 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Frame = +2 Query: 74 KLHFLLAKILQILK-RQVTNPMKKTSVN*KAFYVQFHLTQYVCRLWVGLVVSSA 232 K +L + ++ L +V N +K+ V KAFY LT Y+C ++V +V+S++ Sbjct: 98 KCREVLGRYVESLNFHKVKNCIKEAKVLMKAFYGANVLTAYICSVFV-IVLSNS 150 >At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA11) identical to SP|Q9M2L4|ACAB_ARATH Potential calcium-transporting ATPase 11, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis thaliana}; strong similarity to calmodulin-stimulated calcium-ATPase [Brassica oleracea] GI:1805654 Length = 1025 Score = 27.1 bits (57), Expect = 5.2 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283 +VQF LT V V L+++ AC+T + AVQ+++ Sbjct: 804 FVQFQLTVNV----VALIINFVSACITGSAPLTAVQLLW 838 >At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical to SP|O22218 Calcium-transporting ATPase 4, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4) {Arabidopsis thaliana} Length = 1030 Score = 27.1 bits (57), Expect = 5.2 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283 +VQF LT V V L+++ AC+T + AVQ+++ Sbjct: 807 FVQFQLTVNV----VALIINFVSACITGSAPLTAVQLLW 841 >At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7) identical to SP|O64806 Potential calcium-transporting ATPase 7, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong similarity to SP|O81108 Calcium-transporting ATPase 2, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2) {Arabidopsis thaliana} Length = 1015 Score = 27.1 bits (57), Expect = 5.2 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +2 Query: 167 YVQFHLTQYVCRLWVGLVVSSAGACVTRTPACIAVQMIF 283 +VQF LT V V L+V+ + AC+T + AVQ+++ Sbjct: 814 FVQFQLTVNV----VALIVNFSSACLTGSAPLTAVQLLW 848 >At5g48070.1 68418.m05939 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative similar to xyloglucan endotransglycosylase TCH4 GI:886116 from [Arabidopsis thaliana] Length = 282 Score = 26.6 bits (56), Expect = 6.8 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -1 Query: 213 PTHNLHTYCVKWN 175 PT + HTYC+ WN Sbjct: 142 PTVDFHTYCIIWN 154 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,927,224 Number of Sequences: 28952 Number of extensions: 114605 Number of successful extensions: 206 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 206 length of database: 12,070,560 effective HSP length: 74 effective length of database: 9,928,112 effective search space used: 645327280 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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