BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M05 (591 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_0913 + 22540078-22540166,22540280-22540420,22541151-225412... 40 0.002 11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 34 0.097 05_04_0435 - 21198234-21198379,21199012-21199030,21199093-211993... 29 2.1 02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 29 2.8 08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 4.8 12_01_0562 - 4555384-4555673,4555775-4555883,4555981-4556084,455... 28 6.4 06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 28 6.4 01_05_0680 - 24238840-24241242 28 6.4 11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 27 8.5 10_08_0510 + 18430580-18431781,18433176-18433554 27 8.5 06_01_1128 + 9300144-9300273,9300340-9300472,9300585-9300656,930... 27 8.5 01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 27 8.5 >08_02_0913 + 22540078-22540166,22540280-22540420,22541151-22541281, 22542278-22542460,22542555-22543195 Length = 394 Score = 39.5 bits (88), Expect = 0.002 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Frame = +1 Query: 403 TTLTGLQVGRISGLDPAGPCFSNIPAELRLKHTDA--KYVDVIHTDGGVY 546 TT GL + + + PAGP F ++P + TDA K VD +H GG++ Sbjct: 58 TTQGGLLISEGTVVSPAGPGFPHVPGIYNQEQTDAWKKVVDAVHAKGGIF 107 >11_08_0034 - 27827583-27827998,27828111-27829430,27829568-27831008 Length = 1058 Score = 33.9 bits (74), Expect = 0.097 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = +1 Query: 220 LDGSSLIRWLYLHSTTYVRFIGEKLGEVLAAMAKGGMSPDAIHLIGHSLGSHISG-FAGK 396 L GS W L +Y+ +++ KG ++ + + L ++L I FA Sbjct: 571 LVGSLPTSWGQLQLLSYLNLSQNTFNDLIPDSFKGLVNLETLDLSHNNLSGGIPKYFANL 630 Query: 397 TFTTLTGLQVGRISGLDPAGPCFSNI 474 TF T L + G P+G FSNI Sbjct: 631 TFLTSLNLSFNNLQGQIPSGGVFSNI 656 >05_04_0435 - 21198234-21198379,21199012-21199030,21199093-21199302, 21199393-21199522,21199625-21199795,21199931-21200053, 21200185-21200289,21200412-21201124 Length = 538 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%) Frame = +1 Query: 88 LSRDYDPHRKLIIFIHGFTD---DPTKENFNVISNG 186 L D P+R++I+++HG +D +PT +N N+ G Sbjct: 475 LEVDDFPYREIILYVHGSSDSAGEPTGQNKNICEAG 510 >02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824, 22436458-22436574,22436702-22436803,22437431-22437487, 22437976-22438044,22438423-22438533,22438597-22438791, 22439023-22439121,22439656-22440222,22440344-22440568, 22441036-22441338,22441640-22441707,22441947-22442105, 22442230-22442475,22442549-22442680,22443243-22443351, 22444131-22444283,22444359-22444601,22444695-22444862, 22445013-22445156,22445238-22445699,22446495-22446791, 22446867-22447024,22447139-22447246,22447474-22447732 Length = 1752 Score = 29.1 bits (62), Expect = 2.8 Identities = 21/95 (22%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Frame = +1 Query: 109 HRKLIIFIHGFTDDPTKENFNVISNGFLNQGEFNILALD----GSSLIRWLYLHSTTYVR 276 H K+I+F+HGF T E++ + ++A+D G S I + ++ + Sbjct: 1479 HEKVILFLHGFLG--TSEDWVPMMKAL--SPSARVIAVDLPGHGESEILQHDVENSNQIS 1534 Query: 277 FIGEKLGEVLAAMAKGGMSPDAIHLIGHSLGSHIS 381 F + + ++L + + ++ A+ ++G+S+G+ I+ Sbjct: 1535 FSVQSVADLLLKLIR-NITDGAVVVVGYSMGARIA 1568 >08_02_0918 - 22617388-22617693,22617799-22617848,22618538-22618817, 22619654-22620340,22622870-22622944,22623150-22623285, 22624801-22625093,22625776-22626597 Length = 882 Score = 28.3 bits (60), Expect = 4.8 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = -2 Query: 329 IPPFAIAARTSPSFSPMNRTYVVEWRYSQRMRELPSRAKMLNSPWFRKP 183 IPPF ++ S S P+ RT + + +R LPS + SP +P Sbjct: 427 IPPFPDSSSVSSSSQPVVRTSALSRAWRRRWAALPS-VDLARSPGISEP 474 >12_01_0562 - 4555384-4555673,4555775-4555883,4555981-4556084, 4556643-4556946 Length = 268 Score = 27.9 bits (59), Expect = 6.4 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +1 Query: 367 GSHISGFAGKTFTTLTGLQVGRISGL-DP 450 G + GFAG++ GL GRI GL DP Sbjct: 70 GVSVFGFAGESMAVKQGLLAGRIPGLSDP 98 >06_03_0442 + 20837492-20837621,20841842-20842075,20842435-20842528, 20842653-20842870,20842956-20843095,20843231-20843878 Length = 487 Score = 27.9 bits (59), Expect = 6.4 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = +1 Query: 352 IGHSLGSHISGFAGKTFTTLTGLQVG 429 +G SL ISG GK TTLTG++VG Sbjct: 216 VGLSLARTISGATGK--TTLTGVEVG 239 >01_05_0680 - 24238840-24241242 Length = 800 Score = 27.9 bits (59), Expect = 6.4 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +1 Query: 97 DYDPHRKLIIFIHGFTDDPTKENFNVISNGFLNQGEF-NILALDGSSLIRWLYLHSTTYV 273 D D RKL+ ++ P +N++ NG+L G+ L L R + TTY Sbjct: 716 DIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYD 775 Query: 274 RFIGEK 291 +G K Sbjct: 776 ILVGMK 781 >11_08_0032 - 27807489-27807497,27807641-27807684,27808046-27808168, 27810770-27810983,27811382-27811530,27811719-27812618, 27812964-27814659 Length = 1044 Score = 27.5 bits (58), Expect = 8.5 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = +1 Query: 340 AIHLIGHSLGSHISG------FAGKTFTTLTGLQVGRISGLDPAGPCFSNI 474 A+ L G++L S+I F+ T+ T L + G P+G FSNI Sbjct: 551 ALSLSGNNLSSYIPNGGIPKYFSNLTYLTSLNLSFNNLQGQIPSGGIFSNI 601 >10_08_0510 + 18430580-18431781,18433176-18433554 Length = 526 Score = 27.5 bits (58), Expect = 8.5 Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 10/128 (7%) Frame = +1 Query: 97 DYDPHRKLIIFIHGFTDD-----PTKENFNVISNGFLNQGEFNILALD---GSSLIRWLY 252 D + ++ + +H DD P +++ + NGF +G+ + + LD +++ + Sbjct: 63 DENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKM-LDQRISPNVVTYNS 121 Query: 253 LHSTTYVRFIGEKLGEVLAAMAKGGMSPDAIHLIGHSLGSHISGF--AGKTFTTLTGLQV 426 + + +K EVL M K G+ PD + + S + GF +G+ + L+ Sbjct: 122 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCM-----TYNSIVHGFCSSGQPKEAIVFLKK 176 Query: 427 GRISGLDP 450 R G++P Sbjct: 177 MRSDGVEP 184 >06_01_1128 + 9300144-9300273,9300340-9300472,9300585-9300656, 9300783-9300926,9301453-9301524,9301584-9301677, 9301782-9301928 Length = 263 Score = 27.5 bits (58), Expect = 8.5 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 331 SPDAIHLIGHSLGSHISGFAGKTFTTLTGLQVGRISGLDPAGPCFSNIPAELRLKHTD 504 SPD++ + G H+SG + LT L+ + + +GP + I LK D Sbjct: 80 SPDSLVTTLEAPGQHLSGLLAPSIGDLTNLETILLQNNNISGPIPAEIGKLANLKRLD 137 >01_05_0501 + 22764978-22765896,22766087-22766349,22766613-22766836, 22767419-22767749,22767968-22768372 Length = 713 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +1 Query: 136 GFTDDPTKENFN-VISNGFLNQGEFNILALDGSSLIRWLYLHSTT 267 G+ D+ N ++S+ LNQ + L D SS++ W+ S T Sbjct: 210 GYDDESVSGNVEGIVSSVQLNQAKSRALGDDNSSMVSWVTKDSDT 254 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,503,621 Number of Sequences: 37544 Number of extensions: 376451 Number of successful extensions: 988 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 963 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 988 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1400060088 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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