SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M03
         (470 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy...    36   0.003
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|...    34   0.013
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ...    33   0.022
SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharom...    32   0.038
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer...    31   0.089
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy...    31   0.089
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch...    30   0.15 
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3...    29   0.36 
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|...    27   1.4  
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz...    27   1.9  
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac...    26   2.5  
SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    26   3.3  
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ...    26   3.3  
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch...    26   3.3  
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces...    26   3.3  
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc...    25   4.4  
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual    25   4.4  
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha...    25   5.8  
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa...    25   5.8  
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1...    25   7.7  
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch...    25   7.7  
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1...    25   7.7  
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo...    25   7.7  
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces...    25   7.7  

>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
           N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 543

 Score = 35.9 bits (79), Expect = 0.003
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 159 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASD 305
           RT+ Y+DF+         K VLD  CGTGI SM     G   V +VD SD
Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288


>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
           methyltransferase|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 271

 Score = 33.9 bits (74), Expect = 0.013
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 177 DFLIGLLKKHGC---KKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALK 329
           DF+  + ++  C   KK+LD  CG GI S  +   G ++ +VDAS   ++ A K
Sbjct: 64  DFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKK 117


>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 268

 Score = 33.1 bits (72), Expect = 0.022
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +3

Query: 192 LLKKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKAR 335
           LL   G   +LD  CG+GI + +   +G  +V +D S  ML  AL+++
Sbjct: 42  LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89


>SPBC21C3.07c |||actin binding methyltransferase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 281

 Score = 32.3 bits (70), Expect = 0.038
 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
 Frame = +3

Query: 96  DQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEG 275
           ++Y D    +   KF  +     Q + + L  L +  G K +L+  CG G     ++ E 
Sbjct: 80  ERYWDQFYGKNEGKFFMNRRWIAQEFPELLDLLKEDAGEKSILEIGCGAGNTIWPILKEN 139

Query: 276 FN----LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFD 443
            N    + +VD S+K +          ++NP YD      + W+    D+      AS D
Sbjct: 140 KNSNLKIFAVDYSEKAIDVV-------KQNPLYDAKFCSASVWDLAGSDLLRSIEEASID 192

Query: 444 AV 449
           A+
Sbjct: 193 AI 194


>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
           Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 339

 Score = 31.1 bits (67), Expect = 0.089
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +3

Query: 93  KDQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDE 272
           KD Y D  +    ++ +   + RT +Y+D ++        K VLD  CGTGI SM     
Sbjct: 16  KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75

Query: 273 GF-NLVSVDASD 305
           G  ++  VD S+
Sbjct: 76  GAKHVYGVDMSE 87


>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 357

 Score = 31.1 bits (67), Expect = 0.089
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = +3

Query: 213 KKVLDGACGTGIDSMMLVDEGFNL-VSVDASDKMLKHALKARWEKRKNPKYDEWVIEEAN 389
           ++VL+   G GI    L ++  +L V ++    +LKH  K  W  R+N      ++ E  
Sbjct: 187 RRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDRENV-----IVYETT 241

Query: 390 WETLPRDIENFY--HGASFDA 446
           WE    DI + Y   G  +DA
Sbjct: 242 WENAINDIASKYVFDGIYYDA 262


>SPBC1347.09 |||hexaprenyldihydroxybenzoate
           methyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 284

 Score = 30.3 bits (65), Expect = 0.15
 Identities = 25/86 (29%), Positives = 39/86 (45%)
 Frame = +3

Query: 198 KKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVI 377
           KK G   +LD ACGTG+ S  L      +V +D S  M+      ++ K   PK +    
Sbjct: 75  KKSGMS-ILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPK-ERACA 131

Query: 378 EEANWETLPRDIENFYHGASFDAVIC 455
              + + L  + +  +    FDAV+C
Sbjct: 132 YVLSLDDLDGNGDEPF-STEFDAVVC 156


>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 260

 Score = 29.1 bits (62), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 216 KVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 323
           ++LD  CG G+ +  LV +   +V +DAS  M+K A
Sbjct: 36  ELLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71


>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1234

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 346 LFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242
           L SH+  +A  +ILS +ST  +L PS      +IP
Sbjct: 179 LRSHILFNALISILSSSSTLHKLYPSGLPYSVTIP 213


>SPBC839.06 |cta3||P-type ATPase, calcium transporting
           Cta3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1037

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 11/15 (73%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
 Frame = +3

Query: 372 VIEEA-NWETLPRDI 413
           VI++A NWETLPRD+
Sbjct: 567 VIDKADNWETLPRDV 581


>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
           Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 585

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 162 FFHYCLQ*ICSTLELPYRLHTDPLHPLKVY 73
           FF++ L  +  TL+  Y  H+D +HP  V+
Sbjct: 202 FFNFLLNSVTETLDEYYGNHSDVMHPKWVH 231


>SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 256

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 301 EASTETRLKPSSTSIMESIPVPQA 230
           ++STE ++ P  T I+  IPVP +
Sbjct: 215 KSSTELKIPPVETRIVAEIPVPSS 238


>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
           factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 533

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +1

Query: 70  KVYLQRV*RISMQTVRQLERGTNSLETVMKEHKIIKTSSSGF*KNTDARKCWTVLAEQGL 249
           K+ L+R   +   T  +++  T   +   +E +I+   + G  KNT ARK    L + GL
Sbjct: 95  KLQLRR--ELDSLTAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARK-QKQLKKNGL 151

Query: 250 TP 255
            P
Sbjct: 152 RP 153


>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 546

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = -1

Query: 392 PISLF-----DYPFIIFWVFPLLPPGFERVLQHFVRSVN*NKIETFVYQHHGVNPCSAST 228
           PIS+F      YP  I W+ P++   F       V  V+ N I    YQH   +  +A+T
Sbjct: 427 PISMFWFAWTCYPHHIHWIVPIIASAFFGFSLLIVFFVSYNYI-IDSYQHMAPSALAAAT 485

Query: 227 VQHFLAS 207
           +  + AS
Sbjct: 486 LVRYSAS 492


>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 684

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 14/62 (22%), Positives = 28/62 (45%)
 Frame = +3

Query: 282 LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLG 461
           LV  D  ++ +K  L   + +R +  YD  +IE+ +     ++  N       + ++  G
Sbjct: 384 LVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEG 443

Query: 462 NS 467
           NS
Sbjct: 444 NS 445


>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 474

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 246 IDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENF 422
           +D+M L D  F  +S D  + +L+  L    EKR   K  E V+    W T   ++E+F
Sbjct: 233 LDAMTLFDV-FPTLSQDTYN-VLRACLCVSPEKRSLAKTREAVLAVTKWTTDDEELESF 289


>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 248

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 300 SDKMLKHALKARWEKRKNPKYDEWVIEEANWETL 401
           SD  L+  ++A+W+     K+   +IE  N +TL
Sbjct: 102 SDPQLQDGMQAKWDPTDVAKHISQIIERYNIKTL 135


>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 720

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -2

Query: 397 VSQLASSITHSSYFGFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIPVPQAPSST 218
           V QL +S+  +S  G FL S  +   CF   SE++    ++     +      P A S+T
Sbjct: 122 VRQLHASLEDASSVGLFLLSLASERVCF---SESANSQEIESIDLGLGSQFGYPIASSNT 178


>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
           Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 294

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 183 GSLYNFVFFHYCLQ*ICSTLELPYRLHTDPLHPLKVYLQISNEKLDPQTL 34
           GS Y    + + L+  C     P  +HTDP +   +       K++PQ +
Sbjct: 54  GSYYTTKIWSFSLK--CHLCSNPIDVHTDPKNTEYIVASGGRRKIEPQDI 101


>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 339

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 355 GFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242
           GFFL    A     ++LS  + + ++KP  T +   +P
Sbjct: 165 GFFLGGASAGGNFVSVLSHIARDEKIKPELTGLWHMVP 202


>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 474

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -2

Query: 430 PW*KFSMSRGNVSQLASSITHSS--YFGFFLFSHLALSACFNILS 302
           PW     +  +   L++SITHS    FG  LFS L +   FN+ S
Sbjct: 136 PWMDKLAASSSRFSLSTSITHSCVFMFGLTLFSRL-IQIPFNLYS 179


>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 588

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +3

Query: 108 DGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGF 278
           + +A RA  +    S E     K+FL+G++ +H   K  D +C   ++ ++ +D+G+
Sbjct: 467 EAEALRADLETCKCSEEDEAGLKEFLLGVIDRH--LKEYD-SCRVRMEHVLQLDQGY 520


>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 325

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 72  GIPSEGVKDQYADGKAARAWNKFIGDSNERTQNYK 176
           GI S G    Y+D K    WN F  + N   +  K
Sbjct: 288 GISSSGRAAGYSDEKKQNLWNLFAEEVNRHREIVK 322


>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1154

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 342 KRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVIC 455
           KR   K  EW   +  W  + R IE     A+FD   C
Sbjct: 634 KRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYC 671


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,044,209
Number of Sequences: 5004
Number of extensions: 43619
Number of successful extensions: 170
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -