BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M03 (470 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 36 0.003 SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 34 0.013 SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.022 SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharom... 32 0.038 SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 31 0.089 SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 31 0.089 SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 30 0.15 SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 29 0.36 SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 1.4 SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 1.9 SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 26 2.5 SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 3.3 SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 26 3.3 SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 3.3 SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 26 3.3 SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 4.4 SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 25 4.4 SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 25 5.8 SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 25 5.8 SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 7.7 SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 25 7.7 SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 25 7.7 SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo... 25 7.7 SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 7.7 >SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methytransferase Rmt3|Schizosaccharomyces pombe|chr 2|||Manual Length = 543 Score = 35.9 bits (79), Expect = 0.003 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 159 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASD 305 RT+ Y+DF+ K VLD CGTGI SM G V +VD SD Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288 >SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|Schizosaccharomyces pombe|chr 3|||Manual Length = 271 Score = 33.9 bits (74), Expect = 0.013 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +3 Query: 177 DFLIGLLKKHGC---KKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALK 329 DF+ + ++ C KK+LD CG GI S + G ++ +VDAS ++ A K Sbjct: 64 DFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKK 117 >SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 268 Score = 33.1 bits (72), Expect = 0.022 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +3 Query: 192 LLKKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKAR 335 LL G +LD CG+GI + + +G +V +D S ML AL+++ Sbjct: 42 LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89 >SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 281 Score = 32.3 bits (70), Expect = 0.038 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Frame = +3 Query: 96 DQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEG 275 ++Y D + KF + Q + + L L + G K +L+ CG G ++ E Sbjct: 80 ERYWDQFYGKNEGKFFMNRRWIAQEFPELLDLLKEDAGEKSILEIGCGAGNTIWPILKEN 139 Query: 276 FN----LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFD 443 N + +VD S+K + ++NP YD + W+ D+ AS D Sbjct: 140 KNSNLKIFAVDYSEKAIDVV-------KQNPLYDAKFCSASVWDLAGSDLLRSIEEASID 192 Query: 444 AV 449 A+ Sbjct: 193 AI 194 >SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase Rmt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 339 Score = 31.1 bits (67), Expect = 0.089 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +3 Query: 93 KDQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDE 272 KD Y D + ++ + + RT +Y+D ++ K VLD CGTGI SM Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75 Query: 273 GF-NLVSVDASD 305 G ++ VD S+ Sbjct: 76 GAKHVYGVDMSE 87 >SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 357 Score = 31.1 bits (67), Expect = 0.089 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = +3 Query: 213 KKVLDGACGTGIDSMMLVDEGFNL-VSVDASDKMLKHALKARWEKRKNPKYDEWVIEEAN 389 ++VL+ G GI L ++ +L V ++ +LKH K W R+N ++ E Sbjct: 187 RRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDRENV-----IVYETT 241 Query: 390 WETLPRDIENFY--HGASFDA 446 WE DI + Y G +DA Sbjct: 242 WENAINDIASKYVFDGIYYDA 262 >SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 284 Score = 30.3 bits (65), Expect = 0.15 Identities = 25/86 (29%), Positives = 39/86 (45%) Frame = +3 Query: 198 KKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVI 377 KK G +LD ACGTG+ S L +V +D S M+ ++ K PK + Sbjct: 75 KKSGMS-ILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPK-ERACA 131 Query: 378 EEANWETLPRDIENFYHGASFDAVIC 455 + + L + + + FDAV+C Sbjct: 132 YVLSLDDLDGNGDEPF-STEFDAVVC 156 >SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 260 Score = 29.1 bits (62), Expect = 0.36 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +3 Query: 216 KVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 323 ++LD CG G+ + LV + +V +DAS M+K A Sbjct: 36 ELLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71 >SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr 1|||Manual Length = 1234 Score = 27.1 bits (57), Expect = 1.4 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 346 LFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242 L SH+ +A +ILS +ST +L PS +IP Sbjct: 179 LRSHILFNALISILSSSSTLHKLYPSGLPYSVTIP 213 >SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schizosaccharomyces pombe|chr 2|||Manual Length = 1037 Score = 26.6 bits (56), Expect = 1.9 Identities = 11/15 (73%), Positives = 14/15 (93%), Gaps = 1/15 (6%) Frame = +3 Query: 372 VIEEA-NWETLPRDI 413 VI++A NWETLPRD+ Sbjct: 567 VIDKADNWETLPRDV 581 >SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosaccharomyces pombe|chr 2|||Manual Length = 585 Score = 26.2 bits (55), Expect = 2.5 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -3 Query: 162 FFHYCLQ*ICSTLELPYRLHTDPLHPLKVY 73 FF++ L + TL+ Y H+D +HP V+ Sbjct: 202 FFNFLLNSVTETLDEYYGNHSDVMHPKWVH 231 >SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 256 Score = 25.8 bits (54), Expect = 3.3 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 301 EASTETRLKPSSTSIMESIPVPQA 230 ++STE ++ P T I+ IPVP + Sbjct: 215 KSSTELKIPPVETRIVAEIPVPSS 238 >SPBP23A10.14c |ell1||RNA polymerase II transcription elongation factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual Length = 533 Score = 25.8 bits (54), Expect = 3.3 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = +1 Query: 70 KVYLQRV*RISMQTVRQLERGTNSLETVMKEHKIIKTSSSGF*KNTDARKCWTVLAEQGL 249 K+ L+R + T +++ T + +E +I+ + G KNT ARK L + GL Sbjct: 95 KLQLRR--ELDSLTAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARK-QKQLKKNGL 151 Query: 250 TP 255 P Sbjct: 152 RP 153 >SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 546 Score = 25.8 bits (54), Expect = 3.3 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = -1 Query: 392 PISLF-----DYPFIIFWVFPLLPPGFERVLQHFVRSVN*NKIETFVYQHHGVNPCSAST 228 PIS+F YP I W+ P++ F V V+ N I YQH + +A+T Sbjct: 427 PISMFWFAWTCYPHHIHWIVPIIASAFFGFSLLIVFFVSYNYI-IDSYQHMAPSALAAAT 485 Query: 227 VQHFLAS 207 + + AS Sbjct: 486 LVRYSAS 492 >SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 684 Score = 25.8 bits (54), Expect = 3.3 Identities = 14/62 (22%), Positives = 28/62 (45%) Frame = +3 Query: 282 LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLG 461 LV D ++ +K L + +R + YD +IE+ + ++ N + ++ G Sbjct: 384 LVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEG 443 Query: 462 NS 467 NS Sbjct: 444 NS 445 >SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 474 Score = 25.4 bits (53), Expect = 4.4 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +3 Query: 246 IDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENF 422 +D+M L D F +S D + +L+ L EKR K E V+ W T ++E+F Sbjct: 233 LDAMTLFDV-FPTLSQDTYN-VLRACLCVSPEKRSLAKTREAVLAVTKWTTDDEELESF 289 >SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual Length = 248 Score = 25.4 bits (53), Expect = 4.4 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +3 Query: 300 SDKMLKHALKARWEKRKNPKYDEWVIEEANWETL 401 SD L+ ++A+W+ K+ +IE N +TL Sbjct: 102 SDPQLQDGMQAKWDPTDVAKHISQIIERYNIKTL 135 >SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 720 Score = 25.0 bits (52), Expect = 5.8 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = -2 Query: 397 VSQLASSITHSSYFGFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIPVPQAPSST 218 V QL +S+ +S G FL S + CF SE++ ++ + P A S+T Sbjct: 122 VRQLHASLEDASSVGLFLLSLASERVCF---SESANSQEIESIDLGLGSQFGYPIASSNT 178 >SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosaccharomyces pombe|chr 2|||Manual Length = 294 Score = 25.0 bits (52), Expect = 5.8 Identities = 13/50 (26%), Positives = 22/50 (44%) Frame = -3 Query: 183 GSLYNFVFFHYCLQ*ICSTLELPYRLHTDPLHPLKVYLQISNEKLDPQTL 34 GS Y + + L+ C P +HTDP + + K++PQ + Sbjct: 54 GSYYTTKIWSFSLK--CHLCSNPIDVHTDPKNTEYIVASGGRRKIEPQDI 101 >SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 339 Score = 24.6 bits (51), Expect = 7.7 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = -2 Query: 355 GFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242 GFFL A ++LS + + ++KP T + +P Sbjct: 165 GFFLGGASAGGNFVSVLSHIARDEKIKPELTGLWHMVP 202 >SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr 1|||Manual Length = 474 Score = 24.6 bits (51), Expect = 7.7 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Frame = -2 Query: 430 PW*KFSMSRGNVSQLASSITHSS--YFGFFLFSHLALSACFNILS 302 PW + + L++SITHS FG LFS L + FN+ S Sbjct: 136 PWMDKLAASSSRFSLSTSITHSCVFMFGLTLFSRL-IQIPFNLYS 179 >SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 588 Score = 24.6 bits (51), Expect = 7.7 Identities = 15/57 (26%), Positives = 31/57 (54%) Frame = +3 Query: 108 DGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGF 278 + +A RA + S E K+FL+G++ +H K D +C ++ ++ +D+G+ Sbjct: 467 EAEALRADLETCKCSEEDEAGLKEFLLGVIDRH--LKEYD-SCRVRMEHVLQLDQGY 520 >SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 325 Score = 24.6 bits (51), Expect = 7.7 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = +3 Query: 72 GIPSEGVKDQYADGKAARAWNKFIGDSNERTQNYK 176 GI S G Y+D K WN F + N + K Sbjct: 288 GISSSGRAAGYSDEKKQNLWNLFAEEVNRHREIVK 322 >SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces pombe|chr 2|||Manual Length = 1154 Score = 24.6 bits (51), Expect = 7.7 Identities = 13/38 (34%), Positives = 16/38 (42%) Frame = +3 Query: 342 KRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVIC 455 KR K EW + W + R IE A+FD C Sbjct: 634 KRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYC 671 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,044,209 Number of Sequences: 5004 Number of extensions: 43619 Number of successful extensions: 170 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 170 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 180421690 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -