Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M03
(470 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 36 0.003
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 34 0.013
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.022
SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharom... 32 0.038
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 31 0.089
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 31 0.089
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 30 0.15
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 29 0.36
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 1.4
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 1.9
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 26 2.5
SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 3.3
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 26 3.3
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 3.3
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 26 3.3
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 4.4
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 25 4.4
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 25 5.8
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 25 5.8
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 7.7
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 25 7.7
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 25 7.7
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo... 25 7.7
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 7.7
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 35.9 bits (79), Expect = 0.003
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 159 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASD 305
RT+ Y+DF+ K VLD CGTGI SM G V +VD SD
Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 33.9 bits (74), Expect = 0.013
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 177 DFLIGLLKKHGC---KKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALK 329
DF+ + ++ C KK+LD CG GI S + G ++ +VDAS ++ A K
Sbjct: 64 DFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKK 117
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 33.1 bits (72), Expect = 0.022
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 192 LLKKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKAR 335
LL G +LD CG+GI + + +G +V +D S ML AL+++
Sbjct: 42 LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89
>SPBC21C3.07c |||actin binding methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 281
Score = 32.3 bits (70), Expect = 0.038
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Frame = +3
Query: 96 DQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEG 275
++Y D + KF + Q + + L L + G K +L+ CG G ++ E
Sbjct: 80 ERYWDQFYGKNEGKFFMNRRWIAQEFPELLDLLKEDAGEKSILEIGCGAGNTIWPILKEN 139
Query: 276 FN----LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFD 443
N + +VD S+K + ++NP YD + W+ D+ AS D
Sbjct: 140 KNSNLKIFAVDYSEKAIDVV-------KQNPLYDAKFCSASVWDLAGSDLLRSIEEASID 192
Query: 444 AV 449
A+
Sbjct: 193 AI 194
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 31.1 bits (67), Expect = 0.089
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 93 KDQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDE 272
KD Y D + ++ + + RT +Y+D ++ K VLD CGTGI SM
Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75
Query: 273 GF-NLVSVDASD 305
G ++ VD S+
Sbjct: 76 GAKHVYGVDMSE 87
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 31.1 bits (67), Expect = 0.089
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 213 KKVLDGACGTGIDSMMLVDEGFNL-VSVDASDKMLKHALKARWEKRKNPKYDEWVIEEAN 389
++VL+ G GI L ++ +L V ++ +LKH K W R+N ++ E
Sbjct: 187 RRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDRENV-----IVYETT 241
Query: 390 WETLPRDIENFY--HGASFDA 446
WE DI + Y G +DA
Sbjct: 242 WENAINDIASKYVFDGIYYDA 262
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 30.3 bits (65), Expect = 0.15
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +3
Query: 198 KKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVI 377
KK G +LD ACGTG+ S L +V +D S M+ ++ K PK +
Sbjct: 75 KKSGMS-ILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPK-ERACA 131
Query: 378 EEANWETLPRDIENFYHGASFDAVIC 455
+ + L + + + FDAV+C
Sbjct: 132 YVLSLDDLDGNGDEPF-STEFDAVVC 156
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 29.1 bits (62), Expect = 0.36
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 216 KVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 323
++LD CG G+ + LV + +V +DAS M+K A
Sbjct: 36 ELLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 27.1 bits (57), Expect = 1.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 346 LFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242
L SH+ +A +ILS +ST +L PS +IP
Sbjct: 179 LRSHILFNALISILSSSSTLHKLYPSGLPYSVTIP 213
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 26.6 bits (56), Expect = 1.9
Identities = 11/15 (73%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +3
Query: 372 VIEEA-NWETLPRDI 413
VI++A NWETLPRD+
Sbjct: 567 VIDKADNWETLPRDV 581
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 2.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 162 FFHYCLQ*ICSTLELPYRLHTDPLHPLKVY 73
FF++ L + TL+ Y H+D +HP V+
Sbjct: 202 FFNFLLNSVTETLDEYYGNHSDVMHPKWVH 231
>SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 3.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 301 EASTETRLKPSSTSIMESIPVPQA 230
++STE ++ P T I+ IPVP +
Sbjct: 215 KSSTELKIPPVETRIVAEIPVPSS 238
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 3.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 70 KVYLQRV*RISMQTVRQLERGTNSLETVMKEHKIIKTSSSGF*KNTDARKCWTVLAEQGL 249
K+ L+R + T +++ T + +E +I+ + G KNT ARK L + GL
Sbjct: 95 KLQLRR--ELDSLTAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARK-QKQLKKNGL 151
Query: 250 TP 255
P
Sbjct: 152 RP 153
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 25.8 bits (54), Expect = 3.3
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -1
Query: 392 PISLF-----DYPFIIFWVFPLLPPGFERVLQHFVRSVN*NKIETFVYQHHGVNPCSAST 228
PIS+F YP I W+ P++ F V V+ N I YQH + +A+T
Sbjct: 427 PISMFWFAWTCYPHHIHWIVPIIASAFFGFSLLIVFFVSYNYI-IDSYQHMAPSALAAAT 485
Query: 227 VQHFLAS 207
+ + AS
Sbjct: 486 LVRYSAS 492
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 25.8 bits (54), Expect = 3.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 282 LVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVICLG 461
LV D ++ +K L + +R + YD +IE+ + ++ N + ++ G
Sbjct: 384 LVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEG 443
Query: 462 NS 467
NS
Sbjct: 444 NS 445
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 246 IDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENF 422
+D+M L D F +S D + +L+ L EKR K E V+ W T ++E+F
Sbjct: 233 LDAMTLFDV-FPTLSQDTYN-VLRACLCVSPEKRSLAKTREAVLAVTKWTTDDEELESF 289
>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 25.4 bits (53), Expect = 4.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 300 SDKMLKHALKARWEKRKNPKYDEWVIEEANWETL 401
SD L+ ++A+W+ K+ +IE N +TL
Sbjct: 102 SDPQLQDGMQAKWDPTDVAKHISQIIERYNIKTL 135
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 25.0 bits (52), Expect = 5.8
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 397 VSQLASSITHSSYFGFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIPVPQAPSST 218
V QL +S+ +S G FL S + CF SE++ ++ + P A S+T
Sbjct: 122 VRQLHASLEDASSVGLFLLSLASERVCF---SESANSQEIESIDLGLGSQFGYPIASSNT 178
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 25.0 bits (52), Expect = 5.8
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -3
Query: 183 GSLYNFVFFHYCLQ*ICSTLELPYRLHTDPLHPLKVYLQISNEKLDPQTL 34
GS Y + + L+ C P +HTDP + + K++PQ +
Sbjct: 54 GSYYTTKIWSFSLK--CHLCSNPIDVHTDPKNTEYIVASGGRRKIEPQDI 101
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 24.6 bits (51), Expect = 7.7
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 355 GFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIP 242
GFFL A ++LS + + ++KP T + +P
Sbjct: 165 GFFLGGASAGGNFVSVLSHIARDEKIKPELTGLWHMVP 202
>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 24.6 bits (51), Expect = 7.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -2
Query: 430 PW*KFSMSRGNVSQLASSITHSS--YFGFFLFSHLALSACFNILS 302
PW + + L++SITHS FG LFS L + FN+ S
Sbjct: 136 PWMDKLAASSSRFSLSTSITHSCVFMFGLTLFSRL-IQIPFNLYS 179
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 24.6 bits (51), Expect = 7.7
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 108 DGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGF 278
+ +A RA + S E K+FL+G++ +H K D +C ++ ++ +D+G+
Sbjct: 467 EAEALRADLETCKCSEEDEAGLKEFLLGVIDRH--LKEYD-SCRVRMEHVLQLDQGY 520
>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 325
Score = 24.6 bits (51), Expect = 7.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 72 GIPSEGVKDQYADGKAARAWNKFIGDSNERTQNYK 176
GI S G Y+D K WN F + N + K
Sbjct: 288 GISSSGRAAGYSDEKKQNLWNLFAEEVNRHREIVK 322
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 24.6 bits (51), Expect = 7.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 342 KRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVIC 455
KR K EW + W + R IE A+FD C
Sbjct: 634 KRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYC 671
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,044,209
Number of Sequences: 5004
Number of extensions: 43619
Number of successful extensions: 170
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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