Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M01
(535 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16) 109 2e-24
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 93 2e-19
SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14) 88 4e-18
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 54 6e-08
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 50 1e-06
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 50 1e-06
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 45 3e-05
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 44 1e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 40 0.001
SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096) 39 0.002
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 38 0.005
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 38 0.005
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 36 0.021
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 35 0.036
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 35 0.036
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 34 0.084
SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.084
SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 32 0.34
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 32 0.34
SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14) 31 0.45
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 31 0.45
SB_5103| Best HMM Match : Vicilin_N (HMM E-Value=0.36) 30 1.0
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_51421| Best HMM Match : VWA (HMM E-Value=3.5e-27) 29 2.4
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 29 3.2
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_14169| Best HMM Match : YTH (HMM E-Value=0.00023) 28 4.2
SB_26173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_31424| Best HMM Match : Sigma54_activat (HMM E-Value=6.2) 28 5.5
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 27 7.3
SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24) 27 7.3
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14) 27 9.6
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09) 27 9.6
SB_24763| Best HMM Match : zf-P11 (HMM E-Value=0.25) 27 9.6
SB_10154| Best HMM Match : RVT_1 (HMM E-Value=4.3e-17) 27 9.6
>SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16)
Length = 168
Score = 109 bits (261), Expect = 2e-24
Identities = 49/96 (51%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Frame = +1
Query: 118 QSSRGSRK-AKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 294
+ +GS+K A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I KNDL+A FDSLG+L
Sbjct: 4 KGKKGSKKKAQRATSNVFAMFEQSQIQEFKEAFNMIDQNRDGFIDKNDLKAVFDSLGKLV 63
Query: 295 SEKELDEMVGEAPGPINFTQLLGLFAXRMSGGSDEE 402
+++ +++M+ EA GPINFT L LF ++SG E+
Sbjct: 64 NDEYVEDMLNEASGPINFTMFLTLFGEKISGTDPED 99
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +2
Query: 404 DVVFNAFKTFDEQGE--IDSERLRHALMTWGDKFSADEVHEAYDQ 532
DV+ NAF +FD +G+ ID E+L+ M+ D+ +A+E + D+
Sbjct: 99 DVIRNAFGSFDLEGKGSIDEEKLKRLCMSMSDRMTAEEWEDMMDE 143
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +1
Query: 136 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 315
++A R SNVF+MF Q Q+ EFKEAF ++D + DG I K DL SLG+ ++ L+E
Sbjct: 12 KRAHRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPTDGYLEE 71
Query: 316 MVGEAPGPINFTQLLGLFAXRMSGGSDEE 402
MV E+PGPINFT L LF +++G E+
Sbjct: 72 MVKESPGPINFTMFLTLFGEKLNGTDPED 100
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +2
Query: 404 DVVFNAFKTFDE--QGEIDSERLRHALMTWGDKFSADEVHE 520
DV+ NAF FDE G I + L+ A+M+ GD+FS ++V +
Sbjct: 100 DVIRNAFACFDEDGNGRIHEDLLKEAMMSMGDRFSDEQVDD 140
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 202 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP 333
+ AF D D +G I ++ L+ S+G S++++D+++ +AP
Sbjct: 103 RNAFACFDEDGNGRIHEDLLKEAMMSMGDRFSDEQVDDILRDAP 146
>SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)
Length = 133
Score = 88.2 bits (209), Expect = 4e-18
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = +1
Query: 136 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 315
++A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I K DL+ + SLG+ +++ LD+
Sbjct: 12 KRAQRATSNVFAMFDQTQIQEFKEAFNMIDQNRDGFIDKEDLKDMYASLGKSPNDQFLDD 71
Query: 316 MVGEAPG-PINFTQLLGLFAXRMSGGSDEE 402
M+ EA G INFT L LF +++G E+
Sbjct: 72 MIEEASGSTINFTMFLTLFGEKLNGTDPED 101
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 58.0 bits (134), Expect = 4e-09
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = +1
Query: 178 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP----GPIN 345
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 346 FTQLLGLFAXRMSGGSDEE 402
F + L + A +M EE
Sbjct: 66 FPEFLTMMARKMKDTDSEE 84
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 AFKTFDEQGE--IDSERLRHALMTWGDKFSADEVHE 520
AF+ FD+ G I + LRH + G+K + +EV E
Sbjct: 89 AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 157 SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP- 333
S+V S++QVAE KEAF L D D G I ++L SLG+ +E+EL +M+ E
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEVDQ 337
Query: 334 ---GPINFTQLLGLFAXRMSGGSDEE 402
G I+F + L + A ++ EE
Sbjct: 338 DDNGEIDFPEFLQMVAKKIKETDTEE 363
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
E ++AF++ D + DG+I ++L+ +LG ++ E+DEM+ EA
Sbjct: 364 EIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA 408
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 199 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP----GPINFTQLLGL 366
FKEAF L D D DG I +L SLG+ +E EL +M+ E G I+F + L +
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 367 FAXRMSGGSDEE 402
A +M EE
Sbjct: 62 MARKMKNTDSEE 73
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 118
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 AFKTFDEQGE--IDSERLRHALMTWGDKFSADEVHE 520
AF+ FD+ G I + LRH + G+K + +EV E
Sbjct: 78 AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 113
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 199 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP----GPINFTQLLGL 366
FKEAF L D D DG I +L SLG+ +E EL +M+ E G I+F + L +
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 367 FAXRMSGGSDEE 402
A +M EE
Sbjct: 62 MARKMKNTDSEE 73
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 118
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 AFKTFDEQGE--IDSERLRHALMTWGDKFSADEVHE 520
AF+ FD+ G I + LRH + G+K + +EV E
Sbjct: 78 AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 113
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = +1
Query: 178 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAPGPINFTQL 357
S+ Q+AE+KEAF + D+D++G I ++L + +LG+ +E + +M+ A + T+
Sbjct: 5 SKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPTEDMIRDMIASA----DRTEF 60
Query: 358 LGLFAXRMSGGSDE 399
L + SG + E
Sbjct: 61 LSMMCTVQSGKTQE 74
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
E + AF+ MD D DG I DL+ T S+ +L M+ +A
Sbjct: 74 EIRMAFKSMDKDGDGFITFGDLKKTMQECDENLSDDDLKRMIIDA 118
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Frame = +1
Query: 193 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----PGPINFTQLL 360
AE +EAF++ D + DG I + +LR+ SLG S+ E+ EM+ EA G INF + +
Sbjct: 73 AEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREADLDGDGVINFQEFV 132
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 AFKTFDEQGE--IDSERLRHALMTWGDKFSADEVHE 520
AF+ FD G+ I LR + + G+K S DE+ E
Sbjct: 78 AFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKE 113
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 172 MFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
M Q E +EAF++ D D +G I +LR +LG +++E++EM+ EA
Sbjct: 41 MGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEA 93
Score = 31.1 bits (67), Expect = 0.59
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 401 NDVVFNAFKTFDEQGE--IDSERLRHALMTWGDKFSADEVHE 520
++ + AF+ FD+ G I + LRH + G+K + +EV E
Sbjct: 47 DEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEE 88
>SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096)
Length = 322
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 253 NDLRATFDSLGRLASEKELDEMVGEAPGPINFTQLLGLFAXRMSGGSDEE 402
+DLR T SLG+ + +E+D+M+ P NFT L +F RM+ E+
Sbjct: 178 DDLRGTLSSLGQKPTFEEIDDMMEGKPS-FNFTSFLSMFGLRMANTDPED 226
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 193 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP----GPINFTQLL 360
A++KEAF + D D G + +L +LG +E+E+ EMV E G ++F + +
Sbjct: 148 AQYKEAFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFV 207
Query: 361 GLFAXRMSGGSDEE 402
L + +E+
Sbjct: 208 DLMENQKKPDEEEQ 221
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 178 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----PGPIN 345
+++Q+ EFK AF D + DG I +L S+G ++EL M+ +A G I+
Sbjct: 10 TEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDID 69
Query: 346 FTQLLGLFAXRMSGGSDE 399
+ + L A + + E
Sbjct: 70 LPEFIELMASKSKNDTTE 87
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 193 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----PGPINFTQLL 360
++ +EAF L D D +G+I +++ F +G +EKE E+V +A G IN+ +
Sbjct: 88 SDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELVKQADMDGDGHINYEEFK 147
Query: 361 GLF 369
F
Sbjct: 148 NAF 150
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 193 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 330
++ +EAF L D D +G+I +++ +G +EKE E+V +A
Sbjct: 217 SDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA 262
Score = 33.9 bits (74), Expect = 0.084
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----PGPINFTQLLG 363
EFK AF D + DG I +L S+G ++EL M+ +A G I+ + +
Sbjct: 145 EFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIE 204
Query: 364 LFAXRMSGGSDE 399
L A + + E
Sbjct: 205 LMASKSKNDTTE 216
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 178 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 327
++ QV E KEAF + D + DG I +L+ SLG +E EL +M+ +
Sbjct: 207 TESQVREIKEAFLVFDDNGDGCITATELKKLVTSLGYNITEAELMDMMNQ 256
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 190 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 327
++++++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 47 ISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 92
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 199 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 327
+++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 2 YRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 44
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE-MVG 324
F E F++ D + +G+IG +LR SLG S++E+D MVG
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNLMVG 49
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 404 DVVFNAFKTFDEQGE--IDSERLRHALMTWGDKFSADEV 514
D FK FD G I + LRH L + GDK S +EV
Sbjct: 5 DYFMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEV 43
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EAPGPINFTQLLG 363
++++AF+ D D G I +L SLG +E EL +M+ + G +NF + +
Sbjct: 51 KYRDAFEHFDKDSSGSITTRELGGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDEFVK 110
Query: 364 LFAXRMSGGSDEE 402
L + DEE
Sbjct: 111 LMITKNQFMMDEE 123
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 33.9 bits (74), Expect = 0.084
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 106 TGDRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 285
T D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 7 TPDYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.9 bits (74), Expect = 0.084
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 106 TGDRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 285
T D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 7 TPDYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 178 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL-GRLASEKELDEMVGEA 330
SQ+Q +AFQL D G + K+DL+ F L G S E+ E++ ++
Sbjct: 6 SQEQKTNILQAFQLADKTSKGYLDKHDLKVAFVYLFGYKPSSYEVQELMNKS 57
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 31.9 bits (69), Expect = 0.34
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 202 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP----GPINFTQLLGLF 369
K+AF + D +KDG I + D R +S +E++ E++ + G I++ + L F
Sbjct: 462 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKIDPMNRGYISYLEFLDRF 521
Query: 370 AXRMSGGSD 396
R S D
Sbjct: 522 EHRESPVED 530
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAPGP 339
+ +AF+++D DK G + +L G +++E++EM+ A P
Sbjct: 63 QLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDP 110
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +1
Query: 196 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV 321
+F ++ ++ D+D G+I + +LR +LG ++ E+D ++
Sbjct: 87 DFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLI 128
>SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14)
Length = 227
Score = 31.5 bits (68), Expect = 0.45
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 202 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP----GPINFTQLLGLF 369
K+AF + D +KDG I + D R +S +E++ E++ + G I++ + L F
Sbjct: 162 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKIDPMNRGYISYLEFLDRF 221
Query: 370 AXRMS 384
R S
Sbjct: 222 EHRES 226
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 31.5 bits (68), Expect = 0.45
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 169 SMFSQKQVA---EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEM---VGEA 330
S + +KQ EF E ++ D D G + +LR+ SLG S++E+ + V ++
Sbjct: 578 SAYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPVDDS 637
Query: 331 PGPINF 348
G IN+
Sbjct: 638 SGHINY 643
>SB_5103| Best HMM Match : Vicilin_N (HMM E-Value=0.36)
Length = 592
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +2
Query: 398 RNDVVFNAFKTFDEQGEIDSERLRHALM----TWGDKFSADE 511
+ND + ++ +T DE+ E + L H+L+ TW +++ DE
Sbjct: 279 QNDGILDSDETMDEEEEEEDNSLLHSLLNPPTTWAERYGEDE 320
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 386 PDMRXAKRPNSWVKLMGPGASPTISSSSFSEASLPR 279
P++R + +P SW P A P ++S S +PR
Sbjct: 861 PNVRQSPKPPSWKSQPSPSARPQVNSKPLSLKPVPR 896
>SB_51421| Best HMM Match : VWA (HMM E-Value=3.5e-27)
Length = 576
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 365 RPNSWVKLMGPGASPTISSSSFSEASLPRESNVARKS 255
RPNS++++ GA T++S S P +V RKS
Sbjct: 194 RPNSYIEIPNLGALDTVNSISILTWIRPENRDVCRKS 230
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 151 TGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 327
T +FS++Q+ EF++AF + + D I + SLG E E+ E + E
Sbjct: 213 TDQEAAKLFSREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNPPEHEVWEYLNE 271
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 154 GSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAP 333
G ++ S S++ + + AF++ D D G + K ++ S+ RLA E+ ++ +
Sbjct: 91 GLSIISRGSKE--TKLRWAFEIYDSDGSGEVSKKEMLEIVRSIFRLAGEEVTAKLPRDEN 148
Query: 334 GPINFTQLLGL 366
P FT L L
Sbjct: 149 TPEKFTSKLFL 159
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Frame = +1
Query: 175 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL--GRLASEKELDEMVGEA----PG 336
F K + +AF + D DK G + L+A F+S+ E+E+ ++ A G
Sbjct: 801 FYHKTDTDILDAFHVFDRDKMGYFDLDKLKAAFESMPDSDTIDEEEMASLIAIADSNQDG 860
Query: 337 PINFTQLLGLFAXRMSGGSDEE 402
+ F + G D +
Sbjct: 861 KVYFQDSYNRYVDNQDNGDDND 882
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 166 FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EAPGP 339
+S Q + EF E + D++ DG + LR SLG + + D +V + G
Sbjct: 72 YSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAIVALQDNHGT 131
Query: 340 INFTQLL 360
I + +L+
Sbjct: 132 IEYEKLV 138
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 112 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI 243
D + + GS K T ++ FS+K+ + +A HD DG+
Sbjct: 196 DLREAYGSSTTKETSASQRVEFSRKKKGSYTDAIPSSTHDNDGM 239
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 178 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 285
+++Q+ EF+ +F D D+ G + N+ + SLG
Sbjct: 512 TEEQMKEFRASFNFFDKDQTGKLEPNEFKQCLVSLG 547
>SB_14169| Best HMM Match : YTH (HMM E-Value=0.00023)
Length = 906
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = -3
Query: 350 VKLMGPGASPTISSSSFSEASLPRESNVARKSFLPMMPSLSWSISWKASLNSATCFCENI 171
++ G +P SSS+F + ++A + FLP+ P +S++ + +NS F ++
Sbjct: 751 IRAPAEGTAPK-SSSAFGGSV----EDIAGEDFLPVDPGCYYSVALRCPINSQRIFWASL 805
Query: 170 EKT 162
++T
Sbjct: 806 KRT 808
>SB_26173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 335 PGASPTISSSSFSEASLPRESNVARKSFLPMMPSLSWSISWKASLNSATCFCENIE 168
P P S +A +P+E + AR M ++W++ W SL C E +E
Sbjct: 316 PFNPPVCDVVSKYQAQVPKEPDPARSGPGVSMLRVAWNLGWYESLEK-LCAVEGVE 370
>SB_31424| Best HMM Match : Sigma54_activat (HMM E-Value=6.2)
Length = 263
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 227 WSISWKASLNSATCFCENIEKTLEPVRLAFRLPREDCLSPV 105
WS W S N CF + + EP+ + L L PV
Sbjct: 50 WSEKWLMSFNPTKCFVMRVTRNREPIVFNYTL-MNHILKPV 89
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 235 DGIIGKNDLRATFDSLGRLASEKELDEMV 321
+G + ND++ F + G S+KE+DE +
Sbjct: 2942 NGTLSYNDIKEYFKACGHQPSQKEIDEAI 2970
>SB_16975| Best HMM Match : MFS_1 (HMM E-Value=2.6e-24)
Length = 1193
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 313 HRAPSLRRACPGSRMWRASRSCR*CHPCRGPLA 215
+R P R A PG+ M++ S SC C RG A
Sbjct: 572 YRRPVTRLAPPGNSMYQTSCSCEECLRKRGEQA 604
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 335 PGASPTISSSSFSEASLPRESNVARKSFLPMMPSLSWSISWKASLNSATCFCENI 171
P ++ + ASLP N AR S P + IS K S++S+T +NI
Sbjct: 353 PARKSLPANEFWKTASLPAGGNRARVSADPRGVEVRLPISTKLSVSSSTSSLDNI 407
>SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14)
Length = 148
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +1
Query: 181 QKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----PGPINF 348
QK+ F DHD G I +++R +E E++ M+ A G ++F
Sbjct: 79 QKEQKCLSRVFNEFDHDSKGYILPSNIRRVLIKFNIDPNESEIEHMMEAADTNEDGKVDF 138
Query: 349 TQLLGLFA 372
+ + +F+
Sbjct: 139 EEFMHIFS 146
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3
Query: 227 WSISWKASLNSATCFCENIEKTLEPVRLAFRLPREDCLSPV 105
W+ W S N CF + + EP+ + L L PV
Sbjct: 166 WAEKWLMSFNPTKCFVMRVTRNREPILFNYTL-MNHILKPV 205
>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
Length = 1338
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 290 SPQRRSSMRWSAKHPVPSTSPSCWVSSLTACPAALTRN-DVVFNAF 424
+P R ++R ++ S+S S + TACPA T+ + + AF
Sbjct: 7 APNRERNVRLTSWTTASSSSSSAILDDTTACPALETQGAQITYGAF 52
>SB_24763| Best HMM Match : zf-P11 (HMM E-Value=0.25)
Length = 155
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 230 SWSISWKASLNSATCFCENIEKTL 159
S +I WK +L S C+N+E TL
Sbjct: 28 SCTIIWKLTLQSCATVCKNMETTL 51
>SB_10154| Best HMM Match : RVT_1 (HMM E-Value=4.3e-17)
Length = 264
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3
Query: 227 WSISWKASLNSATCFCENIEKTLEPVRLAFRLPREDCLSPV 105
W+ W S N CF + + EP+ + L L PV
Sbjct: 166 WAEKWLMSFNPTKCFVMRVTRNREPILFNYTL-MNHILKPV 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,399,547
Number of Sequences: 59808
Number of extensions: 240485
Number of successful extensions: 1013
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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