Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M01
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   2.6  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   3.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.9  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 280 GSRMWRASRSCR*C 239
           GS++W+  RSC  C
Sbjct: 65  GSKIWQMERSCMCC 78


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 476 LMTWGDKFSADEVHEAYD 529
           L  W DKF  +E+   YD
Sbjct: 71  LQNWMDKFRGEEIAILYD 88


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 164 TLEPVRLAFRLPREDCLSPV 105
           T +PV  A++ P E  +S V
Sbjct: 290 TAQPVHSAYKAPEETIISSV 309


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 247 GKNDLRATFDSLGRLASEKELDEMVGEAPGPINFTQL 357
           GK+D R     L   A  K  D  +   P  I FT+L
Sbjct: 179 GKHDYRVWNHQLISYAGYKNPDGTIIGDPANIEFTEL 215


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 465 SGTHS*PGVISSPPTKSTRLTT 530
           S THS P    +P T  T +TT
Sbjct: 642 SSTHSHPHEPGAPATTITTITT 663


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,453
Number of Sequences: 438
Number of extensions: 1746
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)