BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L24 (488 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.5 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.5 EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.0 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.0 DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 3.4 AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 3.4 DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.0 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 23.0 bits (47), Expect = 1.5 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 Query: 163 NFQGPQRVSGHRRKC 119 NF GP R++ R+C Sbjct: 601 NFHGPHRLAARSRRC 615 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 23.0 bits (47), Expect = 1.5 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 Query: 163 NFQGPQRVSGHRRKC 119 NF GP R++ R+C Sbjct: 493 NFHGPHRLAARSRRC 507 >EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 protein. Length = 535 Score = 22.6 bits (46), Expect = 2.0 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 81 RIPWNSNAQAEKKTLPGPLG 22 +IPW+ NA+A K G G Sbjct: 330 QIPWDKNAEALAKWANGQTG 349 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 22.6 bits (46), Expect = 2.0 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +3 Query: 393 PPKGGRPARAESGPAFRPSADLPSRKA 473 PP GG+P + P F P + R A Sbjct: 68 PPSGGQPPQGMPYPRFPPYDRMDIRAA 94 >DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. Length = 314 Score = 21.8 bits (44), Expect = 3.4 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Frame = -1 Query: 176 HPSPEFSRSAESIRTPPQMRCSSRSE-----PYLPSIGFH 72 HP S+ + + PPQ+ + R E P +P + F+ Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256 >AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B protein. Length = 351 Score = 21.8 bits (44), Expect = 3.4 Identities = 7/25 (28%), Positives = 12/25 (48%) Frame = -1 Query: 209 YGYEPARHLHVHPSPEFSRSAESIR 135 + Y P H +P+P + A+ R Sbjct: 76 WNYSPDNHFEQYPNPTYYNLADPAR 100 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 21.0 bits (42), Expect = 6.0 Identities = 8/25 (32%), Positives = 12/25 (48%) Frame = +1 Query: 151 DLENSGEGCTWRCRAGSYPYPQQVS 225 D N G+G + +C YP +S Sbjct: 613 DSINEGDGVSVQCTVSKGDYPLNIS 637 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 121,189 Number of Sequences: 336 Number of extensions: 2847 Number of successful extensions: 10 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 11420693 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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