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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L23
         (559 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-12|AAL16320.2|  597|Caenorhabditis elegans Hypothetical p...    29   1.7  
U41510-6|AAK39382.1|  454|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math ...    29   3.0  
AC006630-8|AAK68330.1|  232|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical pr...    28   4.0  
U53149-1|AAD31546.1|  328|Caenorhabditis elegans Prion-like-(q/n...    28   5.2  
Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    27   6.9  
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p...    27   9.1  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    27   9.1  
U00048-3|AAB53827.3|  315|Caenorhabditis elegans Nematode astaci...    27   9.1  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    27   9.1  

>U28928-12|AAL16320.2|  597|Caenorhabditis elegans Hypothetical
           protein C44B7.2a protein.
          Length = 597

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 183 SATILIICSYRTP*SWDHSGGENARNKE 100
           SA  ++  +Y TP  WD SGGE  R +E
Sbjct: 500 SAPFIVKWAYATPRRWDGSGGEPPRYEE 527


>U41510-6|AAK39382.1|  454|Caenorhabditis elegans Hypothetical
           protein ZC449.1 protein.
          Length = 454

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +1

Query: 31  IHSFVFRLPAAPQSAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIKICAPQ 210
           I++  F LP +P     N  + IL V   L+       RR +TT   +S T  ++ C  Q
Sbjct: 297 IYAEKFCLPESP-FVCQNDEIFILHVQKTLS------KRRRITTKAASSITDCLRKCLEQ 349

Query: 211 TPCAWSVYRPTGRIIDM-NITNNYCECASDSE 303
             C  SVY    +  ++ N+  +  + A DS+
Sbjct: 350 DDCRSSVYISNSKKCELHNVDVSTGDYARDSD 381


>AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math
           domain containingprotein 25 protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 54  TGSTAVGNNESKFDNTPCFVRSRRRYGP 137
           T ST   + + KF N  C V   +RYGP
Sbjct: 2   TNSTRKFSLKQKFTNVSCMVNHEKRYGP 29


>AC006630-8|AAK68330.1|  232|Caenorhabditis elegans Hypothetical
           protein F14H12.8 protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 203 AHILIFAVLLFSLFVVTERLDLGTIAAARTHETRSI 96
           AHI+IF V++  LFV    ++   +  A T + R+I
Sbjct: 118 AHIIIFFVVMIILFVFLSNINSSYVRRATTEKLRNI 153


>Z81556-1|CAB04524.1|  965|Caenorhabditis elegans Hypothetical
           protein F58G1.1 protein.
          Length = 965

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 175 SSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCE 285
           SSTA+     P  P AW +    G ++D  +TN  C+
Sbjct: 816 SSTASRHSAMPAAPKAWDLNIAPGILVDSIVTNPACK 852


>U53149-1|AAD31546.1|  328|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 16
           protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 262 NITNNYCECASDSECQYAEDDSTGVVYRCRPA 357
           N   N C+    S+ Q A+   TG V +C+PA
Sbjct: 269 NSCQNQCQAQQQSQQQCAQACQTGCVAQCQPA 300


>Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical
           protein T28F4.2 protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = +1

Query: 166 NENSSTANIKI---CAPQTPCAWSVYRPTGRIIDMNITNNYCECAS 294
           N+ SST NI +   C    PC  S Y PT  +     T+ Y   +S
Sbjct: 350 NQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSS 395


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
           protein F57F4.4 protein.
          Length = 2090

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 160 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 306
           T N NS  A +  C P + CA    R     ID ++T   C C   +EC
Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
           interacting proteinprotein 1 protein.
          Length = 2153

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 160 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 306
           T N NS  A +  C P + CA    R     ID ++T   C C   +EC
Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698


>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
            K08E5.3b protein.
          Length = 3183

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 472  RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
            RG +YT  C +N++RH I+     + CL+G +      R +D
Sbjct: 1002 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1043


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
            K08E5.3a protein.
          Length = 3767

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 472  RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
            RG +YT  C +N++RH I+     + CL+G +      R +D
Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627


>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
            protein K08E5.3b protein.
          Length = 3183

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 472  RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
            RG +YT  C +N++RH I+     + CL+G +      R +D
Sbjct: 1002 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1043


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
            protein K08E5.3a protein.
          Length = 3767

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 472  RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
            RG +YT  C +N++RH I+     + CL+G +      R +D
Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627


>U00048-3|AAB53827.3|  315|Caenorhabditis elegans Nematode astacin
           protease protein 4 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 375 CFVFFDCWTASVHDTRRIV 319
           C +F  CWTASV + ++++
Sbjct: 12  CAIFATCWTASVVNNKQVI 30


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
            adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 472  RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
            RG +YT  C +N++RH I+     + CL+G +      R +D
Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,226,014
Number of Sequences: 27780
Number of extensions: 288231
Number of successful extensions: 842
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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