BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L23 (559 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 29 1.7 U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical pr... 29 3.0 AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 29 3.0 AC006630-8|AAK68330.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.0 Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical pr... 28 4.0 U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 28 5.2 Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 27 6.9 U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 27 6.9 U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 6.9 Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 9.1 Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 9.1 Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 9.1 Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 9.1 U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astaci... 27 9.1 AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 9.1 >U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical protein C44B7.2a protein. Length = 597 Score = 29.5 bits (63), Expect = 1.7 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 183 SATILIICSYRTP*SWDHSGGENARNKE 100 SA ++ +Y TP WD SGGE R +E Sbjct: 500 SAPFIVKWAYATPRRWDGSGGEPPRYEE 527 >U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical protein ZC449.1 protein. Length = 454 Score = 28.7 bits (61), Expect = 3.0 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Frame = +1 Query: 31 IHSFVFRLPAAPQSAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIKICAPQ 210 I++ F LP +P N + IL V L+ RR +TT +S T ++ C Q Sbjct: 297 IYAEKFCLPESP-FVCQNDEIFILHVQKTLS------KRRRITTKAASSITDCLRKCLEQ 349 Query: 211 TPCAWSVYRPTGRIIDM-NITNNYCECASDSE 303 C SVY + ++ N+ + + A DS+ Sbjct: 350 DDCRSSVYISNSKKCELHNVDVSTGDYARDSD 381 >AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math domain containingprotein 25 protein. Length = 364 Score = 28.7 bits (61), Expect = 3.0 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 54 TGSTAVGNNESKFDNTPCFVRSRRRYGP 137 T ST + + KF N C V +RYGP Sbjct: 2 TNSTRKFSLKQKFTNVSCMVNHEKRYGP 29 >AC006630-8|AAK68330.1| 232|Caenorhabditis elegans Hypothetical protein F14H12.8 protein. Length = 232 Score = 28.7 bits (61), Expect = 3.0 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -3 Query: 203 AHILIFAVLLFSLFVVTERLDLGTIAAARTHETRSI 96 AHI+IF V++ LFV ++ + A T + R+I Sbjct: 118 AHIIIFFVVMIILFVFLSNINSSYVRRATTEKLRNI 153 >Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical protein F58G1.1 protein. Length = 965 Score = 28.3 bits (60), Expect = 4.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 175 SSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCE 285 SSTA+ P P AW + G ++D +TN C+ Sbjct: 816 SSTASRHSAMPAAPKAWDLNIAPGILVDSIVTNPACK 852 >U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 16 protein. Length = 328 Score = 27.9 bits (59), Expect = 5.2 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 262 NITNNYCECASDSECQYAEDDSTGVVYRCRPA 357 N N C+ S+ Q A+ TG V +C+PA Sbjct: 269 NSCQNQCQAQQQSQQQCAQACQTGCVAQCQPA 300 >Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical protein T28F4.2 protein. Length = 545 Score = 27.5 bits (58), Expect = 6.9 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +1 Query: 166 NENSSTANIKI---CAPQTPCAWSVYRPTGRIIDMNITNNYCECAS 294 N+ SST NI + C PC S Y PT + T+ Y +S Sbjct: 350 NQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSS 395 >U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein F57F4.4 protein. Length = 2090 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +1 Query: 160 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 306 T N NS A + C P + CA R ID ++T C C +EC Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698 >U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) interacting proteinprotein 1 protein. Length = 2153 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +1 Query: 160 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 306 T N NS A + C P + CA R ID ++T C C +EC Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698 >Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein K08E5.3b protein. Length = 3183 Score = 27.1 bits (57), Expect = 9.1 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350 RG +YT C +N++RH I+ + CL+G + R +D Sbjct: 1002 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1043 >Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein K08E5.3a protein. Length = 3767 Score = 27.1 bits (57), Expect = 9.1 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350 RG +YT C +N++RH I+ + CL+G + R +D Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627 >Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical protein K08E5.3b protein. Length = 3183 Score = 27.1 bits (57), Expect = 9.1 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350 RG +YT C +N++RH I+ + CL+G + R +D Sbjct: 1002 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1043 >Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical protein K08E5.3a protein. Length = 3767 Score = 27.1 bits (57), Expect = 9.1 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350 RG +YT C +N++RH I+ + CL+G + R +D Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627 >U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astacin protease protein 4 protein. Length = 315 Score = 27.1 bits (57), Expect = 9.1 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = -2 Query: 375 CFVFFDCWTASVHDTRRIV 319 C +F CWTASV + ++++ Sbjct: 12 CAIFATCWTASVVNNKQVI 30 >AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell adhesion receptorMUA-3 precursor protein. Length = 3767 Score = 27.1 bits (57), Expect = 9.1 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -1 Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350 RG +YT C +N++RH I+ + CL+G + R +D Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,226,014 Number of Sequences: 27780 Number of extensions: 288231 Number of successful extensions: 842 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 798 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 842 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1144922904 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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