Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L23
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 29 1.7
U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 29 3.0
AC006630-8|AAK68330.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical pr... 28 4.0
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 28 5.2
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 27 6.9
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 27 6.9
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 6.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 9.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 9.1
U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astaci... 27 9.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 9.1
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 183 SATILIICSYRTP*SWDHSGGENARNKE 100
SA ++ +Y TP WD SGGE R +E
Sbjct: 500 SAPFIVKWAYATPRRWDGSGGEPPRYEE 527
>U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical
protein ZC449.1 protein.
Length = 454
Score = 28.7 bits (61), Expect = 3.0
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 31 IHSFVFRLPAAPQSAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIKICAPQ 210
I++ F LP +P N + IL V L+ RR +TT +S T ++ C Q
Sbjct: 297 IYAEKFCLPESP-FVCQNDEIFILHVQKTLS------KRRRITTKAASSITDCLRKCLEQ 349
Query: 211 TPCAWSVYRPTGRIIDM-NITNNYCECASDSE 303
C SVY + ++ N+ + + A DS+
Sbjct: 350 DDCRSSVYISNSKKCELHNVDVSTGDYARDSD 381
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 54 TGSTAVGNNESKFDNTPCFVRSRRRYGP 137
T ST + + KF N C V +RYGP
Sbjct: 2 TNSTRKFSLKQKFTNVSCMVNHEKRYGP 29
>AC006630-8|AAK68330.1| 232|Caenorhabditis elegans Hypothetical
protein F14H12.8 protein.
Length = 232
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 203 AHILIFAVLLFSLFVVTERLDLGTIAAARTHETRSI 96
AHI+IF V++ LFV ++ + A T + R+I
Sbjct: 118 AHIIIFFVVMIILFVFLSNINSSYVRRATTEKLRNI 153
>Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical
protein F58G1.1 protein.
Length = 965
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 175 SSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCE 285
SSTA+ P P AW + G ++D +TN C+
Sbjct: 816 SSTASRHSAMPAAPKAWDLNIAPGILVDSIVTNPACK 852
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 262 NITNNYCECASDSECQYAEDDSTGVVYRCRPA 357
N N C+ S+ Q A+ TG V +C+PA
Sbjct: 269 NSCQNQCQAQQQSQQQCAQACQTGCVAQCQPA 300
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 166 NENSSTANIKI---CAPQTPCAWSVYRPTGRIIDMNITNNYCECAS 294
N+ SST NI + C PC S Y PT + T+ Y +S
Sbjct: 350 NQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSS 395
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 160 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 306
T N NS A + C P + CA R ID ++T C C +EC
Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 160 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 306
T N NS A + C P + CA R ID ++T C C +EC
Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
RG +YT C +N++RH I+ + CL+G + R +D
Sbjct: 1002 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1043
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
RG +YT C +N++RH I+ + CL+G + R +D
Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
RG +YT C +N++RH I+ + CL+G + R +D
Sbjct: 1002 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1043
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
RG +YT C +N++RH I+ + CL+G + R +D
Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627
>U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astacin
protease protein 4 protein.
Length = 315
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 375 CFVFFDCWTASVHDTRRIV 319
C +F CWTASV + ++++
Sbjct: 12 CAIFATCWTASVVNNKQVI 30
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 472 RGPLYTV-CVKNKRRHNISRNISVHACLSGSYPLFCLLRLLD 350
RG +YT C +N++RH I+ + CL+G + R +D
Sbjct: 1586 RGNIYTCQCGRNEKRHPITDICLKNECLTGEHDCDRSARCID 1627
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,226,014
Number of Sequences: 27780
Number of extensions: 288231
Number of successful extensions: 842
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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