BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L22 (490 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3 SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) 27 6.3 SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24) 27 8.3 SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3 >SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 745 Score = 29.1 bits (62), Expect = 2.1 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -3 Query: 206 QCCNECRLNSINVSITHRNETIENDGKLA 120 QCC++ RL+ ++IT ++ DGK++ Sbjct: 36 QCCSDLRLSEEKLAITFNELDLDGDGKIS 64 >SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 172 Score = 27.5 bits (58), Expect = 6.3 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +2 Query: 377 SLVFDYNFLPCLYS*CSLNC 436 S++ DY+FLPC + C C Sbjct: 70 SVIKDYSFLPCCFKVCHRTC 89 >SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) Length = 646 Score = 27.5 bits (58), Expect = 6.3 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +2 Query: 377 SLVFDYNFLPCLYS*CSLNC 436 S++ DY+FLPC + C C Sbjct: 70 SVIKDYSFLPCCFKVCHRTC 89 >SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24) Length = 316 Score = 27.1 bits (57), Expect = 8.3 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -1 Query: 160 PIEMRQ*KTMESWRKRQVSAHGVKKENIIKDYAVLFRNVV 41 PI Q + E W R + GVK+ +++ Y L R+V+ Sbjct: 219 PILQSQIHSEELWSMRLLKKSGVKELDLVTVYCSLIRSVI 258 >SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 618 Score = 27.1 bits (57), Expect = 8.3 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 29 RSSIHYIPKQNCVILNNILFLNPMSTNLAFTPAFHRFL 142 R + + P+ N +NNI++ NP + T HRFL Sbjct: 66 RCTTNQTPQANVRTVNNIIWYNPPFSKNTSTNIGHRFL 103 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,938,326 Number of Sequences: 59808 Number of extensions: 222841 Number of successful extensions: 502 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 502 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1038380485 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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