Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L22
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AF016684-7|AAB66206.1|  319|Caenorhabditis elegans Hypothetical ...    27   5.5  
AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    27   7.3  
AF067940-4|AAC19201.1|  487|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z81139-5|CAB03481.2|  359|Caenorhabditis elegans Hypothetical
           protein W05H5.6 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +2

Query: 32  SSIHY--IPKQNCVILNNILFLNPMSTNL 112
           +++HY  +P   C ++ N+LFLNP    L
Sbjct: 271 AALHYKIVPSYYCHLIENVLFLNPFLIGL 299


>AF016684-7|AAB66206.1|  319|Caenorhabditis elegans Hypothetical
           protein F45C12.7 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 383 VFDYNFLPCLYS*CSLNCQPK 445
           VFDYN+L C YS     CQ K
Sbjct: 99  VFDYNYLRCKYSLTPNCCQEK 119


>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 306 HFVKGKFLILFPNSLLKVLLGKKNC 232
           HF      I+ PN LL +L  KKNC
Sbjct: 7   HFFLKLSNIVLPNLLLNILYNKKNC 31


>AF067940-4|AAC19201.1|  487|Caenorhabditis elegans Hypothetical
           protein F36F12.2 protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 461 K*IRYTLADSLMNIKNINMVKSCNRIRAKFIGKSYF 354
           K I+ ++ DS   +   +M+K+  R++ K  GKS+F
Sbjct: 267 KTIKTSVLDSKKTLNISSMIKNSKRLKTKDEGKSFF 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,065,675
Number of Sequences: 27780
Number of extensions: 189813
Number of successful extensions: 403
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)