Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L21
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 292 QNVVTRSPPPPSVKSFATSRR 354
           +N     PPPP V+SFA + R
Sbjct: 727 ENNAPPPPPPPRVESFAETVR 747


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 243 NAGWRAVGRNPRRWVLCG 190
           NAGW  +     ++V+CG
Sbjct: 312 NAGWSFLQEGANKFVICG 329


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 639  PIPGYMLYH--QTILCWRTSLYGCXRHTS 559
            P P  ++++  Q +  W  ++ GC +HT+
Sbjct: 946  PCPSNLVFNPDQNVCDWPENVEGCMQHTA 974


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 100 GVLKVSNIICVIFSLLALG 44
           G+ K  N + V+F L+ALG
Sbjct: 131 GLNKKLNTLTVVFMLIALG 149


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 100 GVLKVSNIICVIFSLLALG 44
           G+ K  N + V+F L+ALG
Sbjct: 131 GLNKKLNTLTVVFMLIALG 149


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 193 TQYPSTRVTPYRTP 234
           TQY   + TPY TP
Sbjct: 341 TQYVRHKNTPYHTP 354


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +1

Query: 430  TNSPTVKSSQSETKGSVAQRLSSSP 504
            +N+P++ + + ++   V QR+S +P
Sbjct: 1406 SNNPSISAFRKKSLAYVQQRMSIAP 1430


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +1

Query: 430  TNSPTVKSSQSETKGSVAQRLSSSP 504
            +N+P++ + + ++   V QR+S +P
Sbjct: 1406 SNNPSISAFRKKSLAYVQQRMSIAP 1430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,363
Number of Sequences: 336
Number of extensions: 3873
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)