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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L21
         (662 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      416   e-117
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         416   e-117
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             415   e-116
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              413   e-116
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             369   e-102
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              312   2e-85
SB_54| Best HMM Match : Actin (HMM E-Value=0)                         292   2e-79
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)             240   8e-64
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                    205   3e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)            173   1e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)                130   1e-30
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                112   2e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  89   2e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 71   6e-13
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  38   0.006
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  35   0.051
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)                   33   0.27 
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               32   0.36 
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)                     31   0.63 
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.84 
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.84 
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)                   31   0.84 
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)               30   1.5  
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)                   30   1.9  
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)                   30   1.9  
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)                   30   1.9  
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)                   30   1.9  
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.6  
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)              29   2.6  
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)                 29   3.4  
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)                 29   4.5  
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)                   29   4.5  
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)                   29   4.5  
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)                     29   4.5  
SB_50176| Best HMM Match : RCSD (HMM E-Value=4.9)                      29   4.5  
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)                   29   4.5  
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.5  
SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)               28   5.9  
SB_56732| Best HMM Match : rve (HMM E-Value=0.0016)                    28   5.9  
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)                   28   5.9  
SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)                   28   5.9  
SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25)                   28   5.9  
SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)                   28   5.9  
SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23)                    28   5.9  
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3)                  28   5.9  
SB_39511| Best HMM Match : rve (HMM E-Value=0.0016)                    28   5.9  
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)                    28   5.9  
SB_19226| Best HMM Match : I-set (HMM E-Value=0)                       28   7.8  
SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11)                   28   7.8  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  416 bits (1025), Expect = e-117
 Identities = 198/207 (95%), Positives = 204/207 (98%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
           PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99  PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158

Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
           GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218

Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
           YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 278

Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
           TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 279 TYNSIMKCDVDIRKDLYANTVLSGGST 305


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  416 bits (1024), Expect = e-117
 Identities = 198/207 (95%), Positives = 204/207 (98%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
           PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98  PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157

Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
           GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 217

Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
           YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 218 YVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 277

Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
           TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 278 TYNSIMKCDVDIRKDLYANTVLSGGST 304


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  415 bits (1022), Expect = e-116
 Identities = 197/207 (95%), Positives = 204/207 (98%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
           PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99  PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158

Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
           GV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218

Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
           YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 278

Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
           TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 279 TYNSIMKCDVDIRKDLYANTVLSGGST 305


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  413 bits (1017), Expect = e-116
 Identities = 197/207 (95%), Positives = 204/207 (98%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
           PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98  PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157

Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
           GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLA 217

Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
           YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 218 YVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 277

Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
           TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 278 TYNSIMKCDVDIRKDLYANTVLSGGST 304


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  369 bits (908), Expect = e-102
 Identities = 176/190 (92%), Positives = 184/190 (96%)
 Frame = +3

Query: 54  NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 233
           N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137

Query: 234 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 413
           I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197

Query: 414 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVXIRKDLY 593
           SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDV IRKDLY
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 257

Query: 594 ANTVLSGGTT 623
           ANTVLSGGTT
Sbjct: 258 ANTVLSGGTT 267


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  312 bits (766), Expect = 2e-85
 Identities = 162/207 (78%), Positives = 170/207 (82%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
           PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS  
Sbjct: 99  PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS-- 156

Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
                     G  + H +                I  ERGYSFTTTAEREIVRDIKEKLC
Sbjct: 157 ----------GDGVSHTV---------------PIYEERGYSFTTTAEREIVRDIKEKLC 191

Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
           YVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME++GIHET
Sbjct: 192 YVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHET 251

Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
           TYNSIMKCDV IRKDLYANTV+SGGTT
Sbjct: 252 TYNSIMKCDVDIRKDLYANTVMSGGTT 278


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score =  292 bits (716), Expect = 2e-79
 Identities = 131/203 (64%), Positives = 163/203 (80%)
 Frame = +3

Query: 6    EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 185
            E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDG
Sbjct: 2144 EDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDG 2203

Query: 186  VSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 365
            VSHTVP+Y+GY LPHA  R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY
Sbjct: 2204 VSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCY 2263

Query: 366  VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETT 545
             A+D+E+E+  A +S   E  Y LPDGQ I IG+ERFR  E LFQPS LG + +GIHE+ 
Sbjct: 2264 CAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESI 2323

Query: 546  YNSIMKCDVXIRKDLYANTVLSG 614
            + SI KCD+ +R +L+ N VLSG
Sbjct: 2324 FKSIKKCDIDLRAELFHNIVLSG 2346


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score =  240 bits (587), Expect = 8e-64
 Identities = 109/207 (52%), Positives = 144/207 (69%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
           P    VLLTE PLNP  NREKM ++MFE +    +Y+AIQAVL+LYA G  TG+V+DSGD
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161

Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
           GV+H  P+YEG+ALPH   RLD+AGRD+T YL+K++  RGY+F  TA+ E VR +KEKLC
Sbjct: 162 GVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLC 221

Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
           YV  + EQE   A  ++ L + Y LPDG+V+ +  ERF  PEALFQP  + +E  G+ E 
Sbjct: 222 YVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAEL 281

Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
            +N+I   D+  R + Y + VLSGG+T
Sbjct: 282 LFNTIQAADIDTRSEFYKHIVLSGGST 308


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score =  205 bits (500), Expect = 3e-53
 Identities = 96/106 (90%), Positives = 102/106 (96%)
 Frame = +3

Query: 75  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 254
           IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1   IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60

Query: 255 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 392
           GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61  GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score =  173 bits (421), Expect(2) = 1e-46
 Identities = 82/151 (54%), Positives = 112/151 (74%)
 Frame = +3

Query: 9   EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 188
           +HPVLLTEAPLNP+ NREK  ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185

Query: 189 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 368
           SH+VPIYEG+A+PH+I+R D+AGRD++ YL  +L + G+ F +++E EIVR IKE+    
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE---- 241

Query: 369 ALDFEQEMATAASSSSLEKSYELPDGQVITI 461
                       S  S  + Y LPDG +I +
Sbjct: 242 ------------SMESERQQYALPDGSIIEV 260



 Score = 31.5 bits (68), Expect(2) = 1e-46
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +3

Query: 552 SIMKCDVXIRKDLYANTVLSGGTT 623
           +I K D+ +R+ LY+N VLSGG+T
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGST 287


>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
          Length = 149

 Score =  130 bits (314), Expect = 1e-30
 Identities = 59/74 (79%), Positives = 66/74 (89%)
 Frame = +3

Query: 402 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVXIR 581
           A+S  LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE  YN IMKCDV IR
Sbjct: 5   ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64

Query: 582 KDLYANTVLSGGTT 623
           KDLY+N VLSGG+T
Sbjct: 65  KDLYSNCVLSGGST 78


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score =  112 bits (270), Expect = 2e-25
 Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
 Frame = +3

Query: 120  QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 296
            Q  LSLYASG T G+ L SG   +    IYEG+ L H +  L++ G  LT+ L + L + 
Sbjct: 767  QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826

Query: 297  RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 476
            RG++FT+++  +IV DIKEK+CY++ D  +E+    ++  L K Y LPDGQ+I+IG E  
Sbjct: 827  RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886

Query: 477  RCPEALFQPSFLGMEAN 527
               E LF+P  L ++AN
Sbjct: 887  SSMEPLFRPDLL-LQAN 902


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 39/95 (41%), Positives = 64/95 (67%)
 Frame = +3

Query: 12  HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 191
           HP+L++EA  N +  REK+T++MFE +N PA ++   +VL+ +A+GR+ G+V+DSG   +
Sbjct: 34  HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQT 93

Query: 192 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 296
             VP+++GY L  AI+R  LAG  +T    ++  E
Sbjct: 94  SAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 71.3 bits (167), Expect = 6e-13
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 87  TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 263
           ++ T A+     +  S     RT TG V+DSGDGV+H +P+ EGY +   I  + +AGRD
Sbjct: 38  SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97

Query: 264 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 395
           +T ++ ++L ER          E  + IKE+  Y+  D  +E A
Sbjct: 98  ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 453 ITIGNERFRCPEALFQPSFLGME-ANGIHETTYNSIMKCDVXIRKDLYANTVLSGGTT 623
           + +  ERF  PE  F P F   +    + E   N I  C + +R+ LY N VLSGG+T
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGST 253


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
 Frame = +3

Query: 60  EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 221
           + M +I+FE +N  A+     A LS Y       S     +V+D+G   +H VP++ G  
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378

Query: 222 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 401
           +  A+ R            + +L E   +F       ++  +KE  CYV+  F ++M  A
Sbjct: 379 IKKAVRR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIA 417

Query: 402 ---ASSSSLEKSYELPD 443
                 +++ + Y LPD
Sbjct: 418 RQRGKENTIVREYVLPD 434


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 35.1 bits (77), Expect = 0.051
 Identities = 15/55 (27%), Positives = 31/55 (56%)
 Frame = +3

Query: 3   PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 167
           P +H V++T         +E++ +I+   F   A+Y+  Q++L++Y+    +GIV
Sbjct: 525 PVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579


>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
          Length = 349

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +3

Query: 264 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 443
           +T+ L+++  +R + F    +    RD    L  V L     + T ASS S  +S  LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275

Query: 444 GQVITIGNERFRCP 485
              + + + R  CP
Sbjct: 276 LASLVLNSSR-ECP 288


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 156 TGIVLDSGDGVSHTVPI 206
           TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372


>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
          Length = 534

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +3

Query: 51  ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 167
           A +E++ +I+   F   A+Y+  Q++L++Y+    +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458


>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 39/146 (26%), Positives = 51/146 (34%)
 Frame = +1

Query: 10  STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 189
           +TQ  +  LPST +PT  +     + PST  P T      +  T   +P           
Sbjct: 189 TTQQTTTNLPSTRQPTTNQ-QTTTTLPSTKQPTT------TQQTTTTIPSTKQPTTTQQT 241

Query: 190 PTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSVKSFATSRRNSATL 369
            T  PST+  P  T     T P     TT     Q   T     PS K   T+++ +ATL
Sbjct: 242 TTTLPSTK-QPTTTQQTTTTLPSTKQPTT----PQLTTTTF---PSTKQPTTTQQTTATL 293

Query: 370 RSTXXXXXXXXXXXXXXXXXTNSPTV 447
            ST                 T   TV
Sbjct: 294 PSTKQPTTTQQTTATLPTPSTKPTTV 319



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 29/109 (26%), Positives = 44/109 (40%)
 Frame = +1

Query: 4   PRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAM 183
           P +TQ  +  +PST +PT  +     + PST  P T      +  T   +P         
Sbjct: 219 PTTTQQTTTTIPSTKQPTTTQ-QTTTTLPSTKQPTT------TQQTTTTLPSTKQPTTPQ 271

Query: 184 VYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSV 330
           +  T +PST+  P  T     T P     TT  + +  + T S  P +V
Sbjct: 272 LTTTTFPSTK-QPTTTQQTTATLPSTKQPTTTQQTTATLPTPSTKPTTV 319



 Score = 28.7 bits (61), Expect = 4.5
 Identities = 29/106 (27%), Positives = 40/106 (37%)
 Frame = +1

Query: 4   PRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAM 183
           P +TQ  +  LPST +PT  +     + PST  P T         T    P         
Sbjct: 235 PTTTQQTTTTLPSTKQPTTTQ-QTTTTLPSTKQPTT------PQLTTTTFPSTKQPTTTQ 287

Query: 184 VYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPP 321
                 PST+  P  T     T P  +++ T    + +  TR PPP
Sbjct: 288 QTTATLPSTK-QPTTTQQTTATLPTPSTKPT----TVSPTTRQPPP 328


>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 40

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 483 PEALFQPSFLGMEANGIHET 542
           PE +FQPS LG+E  GI ET
Sbjct: 3   PEIIFQPSMLGLEQAGITET 22


>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
          Length = 158

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SETK SV +R + + + W+W+
Sbjct: 96  STKSETKASVVERFNRTSKEWMWR 119


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 22/75 (29%), Positives = 26/75 (34%)
 Frame = +1

Query: 13   TQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYP 192
            T +  P  P+TPKPT              PP      P    TRP VP       +   P
Sbjct: 890  TTTAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRP 949

Query: 193  TQYPSTRVTPYRTPS 237
            T  P T   P   P+
Sbjct: 950  TPPPPTSALPPPIPA 964


>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
          Length = 291

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 35/109 (32%), Positives = 42/109 (38%)
 Frame = -1

Query: 338 NDFTLGGGGERVTTFCENLHQVVCEVATG*VQTQDGVR*GVTLVDGYCVGYTIAGIQHDT 159
           N  T GGGG  V T    L  V+     G     +GV  G +  +GY    T  G Q   
Sbjct: 98  NAGTGGGGGSFVYTSDRRL-LVIAGGGGGASNGYNGVD-GQSGENGYRSSGTNYG-QSRA 154

Query: 158 GGTTGRVQ*EHGLDSYVHGGCVEGLEHNLCHLLSVGFGVEGSFGEQDWV 12
           GGT G     +   S  HGG   G +   C  L    G  G   E+ WV
Sbjct: 155 GGTGGNPGECNSAGSSYHGGVGAGWDGTGCTRLGPEHGERGGSIEKGWV 203


>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
          Length = 291

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S+QSE K SV +R + + ++W+W+
Sbjct: 226 STQSELKASVVERFNRTLKTWMWR 249


>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
          Length = 1097

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SETK SV +R + + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480


>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
          Length = 212

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SETK SV +R + + + W+W+
Sbjct: 93  STKSETKASVVERFNRTFKGWMWR 116


>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
          Length = 1514

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S+QSE K SV +R + + ++W+W+
Sbjct: 59  STQSELKASVVERFNRTLKTWMWR 82


>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1383

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SETK SV +R + + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462


>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2190

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 145  DAYSESTAWIATYMAGVLKVSNIICVIFSLLALGLR 38
            D  SE     AT+ AG L +  +IC+++ LLA   R
Sbjct: 1839 DEESEMFRQAATWSAGALGILTVICLLYELLARSRR 1874


>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2248

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 32/137 (23%), Positives = 48/137 (35%), Gaps = 3/137 (2%)
 Frame = +1

Query: 130  SHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRT---PSCVWT*PVATSQTT**RFSQNV 300
            +H T P   PVS   P    P Q P  R  P  T   P  V       +Q       +  
Sbjct: 1455 THMTTPTKTPVSSPTPVPTKPQQEPEKRDLPLPTGGLPPTVRPDERKLTQNPAPSAPEG- 1513

Query: 301  VTRSPPPPSVKSFATSRRNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSV 480
               SP  PS +S ++   N   L                    TN+P ++ + S ++ + 
Sbjct: 1514 KPGSPGQPSRQSASSETTNEKLLPGKQSPGASSDTELKGTPSVTNTPQLQGTSSASESTQ 1573

Query: 481  AQRLSSSPRSWVWKLTA 531
             Q+ S + +S     TA
Sbjct: 1574 TQQSSQTTQSTTPTATA 1590


>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
          Length = 434

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 10  STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSH 135
           ST +  P +P    PT        S P+THP  T  S P +H
Sbjct: 112 STPTTHPHIPHASTPTTHPHITHASTPTTHPHITHASTPTTH 153



 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = +1

Query: 10  STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 189
           ST +  P +     PT        S P+THP  T  S P +H   P +   S   P + Y
Sbjct: 124 STPTTHPHITHASTPTTHPHITHASTPTTHPHITHASTPTTH---PHIAHASTTHPYITY 180

Query: 190 ---PTQYP 204
              PT +P
Sbjct: 181 ASTPTTHP 188


>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
          Length = 439

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 88  PSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTP 222
           P+T PP      P +    PVV      +P  V PT+ PSTR  P
Sbjct: 99  PTTVPPPVVTDAPTT-VPPPVVTDAPTTVPPPVQPTEPPSTRPPP 142


>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 503

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWR 216


>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
          Length = 440

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 26/79 (32%), Positives = 34/79 (43%)
 Frame = +2

Query: 365 RCARLRAGDGHRCLQQLPREVLRTPRRSSHHNRKRKVPLPRGSLPALVLGYGS*RHPRND 544
           R  R R+    + L+  PR+  RTPR+ S   RKR     +GS           R PR +
Sbjct: 195 RSPRKRSRSPRKMLRS-PRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRS----RSPRRN 249

Query: 545 IQFHHEV*RXHP*RLVRQH 601
            Q H E  R H  R   +H
Sbjct: 250 SQRHKERSRYHRSRSRSRH 268


>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
          Length = 1164

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S+++ETK SV +R + + + W+W+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWR 123


>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
          Length = 1847

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S+++ETK SV +R + + + W+W+
Sbjct: 902 STKNETKASVVERFNRTFKGWMWR 925


>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 39  LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 167
           + PK    ++  ++F  F  P M +A++    + A+G  TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216


>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
          Length = 3489

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 348  KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 488
            +EK+    L+ E E   A  ++ LEK  +L +     +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029


>SB_50176| Best HMM Match : RCSD (HMM E-Value=4.9)
          Length = 396

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 42/170 (24%), Positives = 58/170 (34%), Gaps = 3/170 (1%)
 Frame = +1

Query: 4   PRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAM 183
           P + +S   + PST K T+ R            P T  S      T   V       P+ 
Sbjct: 147 PSTVKSAQVRTPSTVKSTQVRTPSTVKSAQVRTPSTVKSAQVR--TPGTVKSAQVRTPST 204

Query: 184 VYPTQY--PST-RVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSVKSFATSRR 354
           V   Q   PST +    RTPS V +  V T  T   + +Q     +     V++ +T   
Sbjct: 205 VKSAQVRTPSTVKSAQVRTPSTVKSAQVRTPGTV--KSAQVRTPSTVKSAQVRTPSTVIS 262

Query: 355 NSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSVAQRLSSSP 504
                 ST                     TVKS+Q  T G+V     S+P
Sbjct: 263 AQVRTPSTVKSAQVRTPSTVKSAQVRTPSTVKSAQVRTPGTVKSTQVSTP 312


>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
          Length = 1962

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWKLTASTKRH 546
           S++SE K SV +R + + ++W+W+     + H
Sbjct: 724 STRSELKASVVERFNRTLKTWMWRWFTYKETH 755


>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1521

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = -2

Query: 190 DTPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLLALG--LRGASVSKT 17
           +TPSP   + P   PDA    TAW    +   L+ S  + V  S    G  LRGA   K 
Sbjct: 90  ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146

Query: 16  G 14
           G
Sbjct: 147 G 147


>SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)
          Length = 1803

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 628 STRSELKASVVERFNRTLKTWMWR 651


>SB_56732| Best HMM Match : rve (HMM E-Value=0.0016)
          Length = 236

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 54  STRSELKASVVERFNRTLKTWMWR 77


>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1529

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 232 STRSELKASVVERFNRTLKTWMWR 255


>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
          Length = 1575

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451  SSQSETKGSVAQRLSSSPRSWVWK 522
            S++SE K SV +R + + ++W+W+
Sbjct: 1475 STRSELKASVVERFNRTLKTWMWR 1498


>SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 459

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 91  STRSELKASVVERFNRTLKTWMWR 114


>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
          Length = 1725

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 485 STRSELKASVVERFNRTLKTWMWR 508


>SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25)
          Length = 346

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 285 STRSELKASVVERFNRTLKTWMWR 308


>SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 249

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 182 STRSELKASVVERFNRTLKTWMWR 205


>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
          Length = 889

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 430 STRSELKASVVERFNRTLKTWMWR 453


>SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 794

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 171 STRSELKASVVERFNRTLKTWMWR 194


>SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23)
          Length = 346

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 206 STRSELKASVVERFNRTLKTWMWR 229


>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1761

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 176 STRSELKASVVERFNRTLKTWMWR 199


>SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3)
          Length = 736

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = -2

Query: 190 DTPSPESSTIPVVRPDAYSESTAW---IATYM--AGVLKVSNIICVIFSLLALGLRGASV 26
           +TP+P   + P   PDA    TAW     TY   +  L V+   C         LRGA+ 
Sbjct: 90  ETPTPALESAPAAMPDA--TDTAWNRLSVTYFLESEALHVAADACRNGRRHMRTLRGANT 147

Query: 25  SKTGCS 8
            K GC+
Sbjct: 148 GKRGCA 153


>SB_39511| Best HMM Match : rve (HMM E-Value=0.0016)
          Length = 850

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 54  STRSELKASVVERFNRTLKTWMWR 77


>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
          Length = 1058

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 238 STRSELKASVVERFNRTLKTWMWR 261


>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
          Length = 1500

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 139 TRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQT 273
           TR +  P+   +P  +   QYP    +PY T + + T P+ T ++
Sbjct: 223 TRMLTVPLITPVPLFLLLHQYPYANCSPYHTSTRMLTVPLITPES 267


>SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11)
          Length = 357

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
           S++SE K SV +R + + ++W+W+
Sbjct: 212 STRSEFKASVVERFNRTLKTWMWR 235


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,032,188
Number of Sequences: 59808
Number of extensions: 521997
Number of successful extensions: 1890
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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