Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L21
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 416 e-117
SB_56| Best HMM Match : Actin (HMM E-Value=0) 416 e-117
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 415 e-116
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 413 e-116
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 369 e-102
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 312 2e-85
SB_54| Best HMM Match : Actin (HMM E-Value=0) 292 2e-79
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 240 8e-64
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 3e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 173 1e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 130 1e-30
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 112 2e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 89 2e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 6e-13
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 38 0.006
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 35 0.051
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 33 0.27
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 32 0.36
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.63
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 31 0.84
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 30 1.5
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 30 1.9
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 30 1.9
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 30 1.9
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 30 1.9
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 29 2.6
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.4
SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 4.5
SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 4.5
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 29 4.5
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 4.5
SB_50176| Best HMM Match : RCSD (HMM E-Value=4.9) 29 4.5
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 29 4.5
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43) 28 5.9
SB_56732| Best HMM Match : rve (HMM E-Value=0.0016) 28 5.9
SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 5.9
SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24) 28 5.9
SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25) 28 5.9
SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 28 5.9
SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23) 28 5.9
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3) 28 5.9
SB_39511| Best HMM Match : rve (HMM E-Value=0.0016) 28 5.9
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 28 5.9
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 28 7.8
SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11) 28 7.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 416 bits (1025), Expect = e-117
Identities = 198/207 (95%), Positives = 204/207 (98%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 279 TYNSIMKCDVDIRKDLYANTVLSGGST 305
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 416 bits (1024), Expect = e-117
Identities = 198/207 (95%), Positives = 204/207 (98%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 217
Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 218 YVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 277
Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 278 TYNSIMKCDVDIRKDLYANTVLSGGST 304
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 415 bits (1022), Expect = e-116
Identities = 197/207 (95%), Positives = 204/207 (98%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
GV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
YVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 279 TYNSIMKCDVDIRKDLYANTVLSGGST 305
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 413 bits (1017), Expect = e-116
Identities = 197/207 (95%), Positives = 204/207 (98%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLA 217
Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 218 YVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 277
Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
TYNSIMKCDV IRKDLYANTVLSGG+T
Sbjct: 278 TYNSIMKCDVDIRKDLYANTVLSGGST 304
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 369 bits (908), Expect = e-102
Identities = 176/190 (92%), Positives = 184/190 (96%)
Frame = +3
Query: 54 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 233
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 234 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 413
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 414 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVXIRKDLY 593
SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME+ GIHETTYNSIMKCDV IRKDLY
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 257
Query: 594 ANTVLSGGTT 623
ANTVLSGGTT
Sbjct: 258 ANTVLSGGTT 267
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 312 bits (766), Expect = 2e-85
Identities = 162/207 (78%), Positives = 170/207 (82%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS-- 156
Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
G + H + I ERGYSFTTTAEREIVRDIKEKLC
Sbjct: 157 ----------GDGVSHTV---------------PIYEERGYSFTTTAEREIVRDIKEKLC 191
Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
YVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME++GIHET
Sbjct: 192 YVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHET 251
Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
TYNSIMKCDV IRKDLYANTV+SGGTT
Sbjct: 252 TYNSIMKCDVDIRKDLYANTVMSGGTT 278
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 292 bits (716), Expect = 2e-79
Identities = 131/203 (64%), Positives = 163/203 (80%)
Frame = +3
Query: 6 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 185
E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D GDG
Sbjct: 2144 EDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDG 2203
Query: 186 VSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY 365
VSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY
Sbjct: 2204 VSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCY 2263
Query: 366 VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETT 545
A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LFQPS LG + +GIHE+
Sbjct: 2264 CAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESI 2323
Query: 546 YNSIMKCDVXIRKDLYANTVLSG 614
+ SI KCD+ +R +L+ N VLSG
Sbjct: 2324 FKSIKKCDIDLRAELFHNIVLSG 2346
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 240 bits (587), Expect = 8e-64
Identities = 109/207 (52%), Positives = 144/207 (69%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 182
P VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGD
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161
Query: 183 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 362
GV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLC
Sbjct: 162 GVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLC 221
Query: 363 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 542
YV + EQE A ++ L + Y LPDG+V+ + ERF PEALFQP + +E G+ E
Sbjct: 222 YVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAEL 281
Query: 543 TYNSIMKCDVXIRKDLYANTVLSGGTT 623
+N+I D+ R + Y + VLSGG+T
Sbjct: 282 LFNTIQAADIDTRSEFYKHIVLSGGST 308
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 3e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +3
Query: 75 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 254
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 255 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 392
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 173 bits (421), Expect(2) = 1e-46
Identities = 82/151 (54%), Positives = 112/151 (74%)
Frame = +3
Query: 9 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 188
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 189 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 368
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE---- 241
Query: 369 ALDFEQEMATAASSSSLEKSYELPDGQVITI 461
S S + Y LPDG +I +
Sbjct: 242 ------------SMESERQQYALPDGSIIEV 260
Score = 31.5 bits (68), Expect(2) = 1e-46
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 552 SIMKCDVXIRKDLYANTVLSGGTT 623
+I K D+ +R+ LY+N VLSGG+T
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGST 287
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 130 bits (314), Expect = 1e-30
Identities = 59/74 (79%), Positives = 66/74 (89%)
Frame = +3
Query: 402 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVXIR 581
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDV IR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 582 KDLYANTVLSGGTT 623
KDLY+N VLSGG+T
Sbjct: 65 KDLYSNCVLSGGST 78
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 112 bits (270), Expect = 2e-25
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
Frame = +3
Query: 120 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE- 296
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 297 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF 476
RG++FT+++ +IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECI 886
Query: 477 RCPEALFQPSFLGMEAN 527
E LF+P L ++AN
Sbjct: 887 SSMEPLFRPDLL-LQAN 902
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/95 (41%), Positives = 64/95 (67%)
Frame = +3
Query: 12 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 191
HP+L++EA N + REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG +
Sbjct: 34 HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQT 93
Query: 192 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 296
VP+++GY L AI+R LAG +T ++ E
Sbjct: 94 SAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +3
Query: 87 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 263
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 264 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 395
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 453 ITIGNERFRCPEALFQPSFLGME-ANGIHETTYNSIMKCDVXIRKDLYANTVLSGGTT 623
+ + ERF PE F P F + + E N I C + +R+ LY N VLSGG+T
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGST 253
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 9/137 (6%)
Frame = +3
Query: 60 EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 221
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 222 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 401
+ A+ R + +L E +F ++ +KE CYV+ F ++M A
Sbjct: 379 IKKAVRR-----------QLHVLDE---TF-------VINQVKEDTCYVSSQFYKDMEIA 417
Query: 402 ---ASSSSLEKSYELPD 443
+++ + Y LPD
Sbjct: 418 RQRGKENTIVREYVLPD 434
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 3 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 167
P +H V++T +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 525 PVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 264 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 443
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
Query: 444 GQVITIGNERFRCP 485
+ + + R CP
Sbjct: 276 LASLVLNSSR-ECP 288
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 156 TGIVLDSGDGVSHTVPI 206
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 51 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 167
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 31.1 bits (67), Expect = 0.84
Identities = 39/146 (26%), Positives = 51/146 (34%)
Frame = +1
Query: 10 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 189
+TQ + LPST +PT + + PST P T + T +P
Sbjct: 189 TTQQTTTNLPSTRQPTTNQ-QTTTTLPSTKQPTT------TQQTTTTIPSTKQPTTTQQT 241
Query: 190 PTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSVKSFATSRRNSATL 369
T PST+ P T T P TT Q T PS K T+++ +ATL
Sbjct: 242 TTTLPSTK-QPTTTQQTTTTLPSTKQPTT----PQLTTTTF---PSTKQPTTTQQTTATL 293
Query: 370 RSTXXXXXXXXXXXXXXXXXTNSPTV 447
ST T TV
Sbjct: 294 PSTKQPTTTQQTTATLPTPSTKPTTV 319
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/109 (26%), Positives = 44/109 (40%)
Frame = +1
Query: 4 PRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAM 183
P +TQ + +PST +PT + + PST P T + T +P
Sbjct: 219 PTTTQQTTTTIPSTKQPTTTQ-QTTTTLPSTKQPTT------TQQTTTTLPSTKQPTTPQ 271
Query: 184 VYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSV 330
+ T +PST+ P T T P TT + + + T S P +V
Sbjct: 272 LTTTTFPSTK-QPTTTQQTTATLPSTKQPTTTQQTTATLPTPSTKPTTV 319
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/106 (27%), Positives = 40/106 (37%)
Frame = +1
Query: 4 PRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAM 183
P +TQ + LPST +PT + + PST P T T P
Sbjct: 235 PTTTQQTTTTLPSTKQPTTTQ-QTTTTLPSTKQPTT------PQLTTTTFPSTKQPTTTQ 287
Query: 184 VYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPP 321
PST+ P T T P +++ T + + TR PPP
Sbjct: 288 QTTATLPSTK-QPTTTQQTTATLPTPSTKPT----TVSPTTRQPPP 328
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 483 PEALFQPSFLGMEANGIHET 542
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SETK SV +R + + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = +1
Query: 13 TQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYP 192
T + P P+TPKPT PP P TRP VP + P
Sbjct: 890 TTTAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRP 949
Query: 193 TQYPSTRVTPYRTPS 237
T P T P P+
Sbjct: 950 TPPPPTSALPPPIPA 964
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 30.3 bits (65), Expect = 1.5
Identities = 35/109 (32%), Positives = 42/109 (38%)
Frame = -1
Query: 338 NDFTLGGGGERVTTFCENLHQVVCEVATG*VQTQDGVR*GVTLVDGYCVGYTIAGIQHDT 159
N T GGGG V T L V+ G +GV G + +GY T G Q
Sbjct: 98 NAGTGGGGGSFVYTSDRRL-LVIAGGGGGASNGYNGVD-GQSGENGYRSSGTNYG-QSRA 154
Query: 158 GGTTGRVQ*EHGLDSYVHGGCVEGLEHNLCHLLSVGFGVEGSFGEQDWV 12
GGT G + S HGG G + C L G G E+ WV
Sbjct: 155 GGTGGNPGECNSAGSSYHGGVGAGWDGTGCTRLGPEHGERGGSIEKGWV 203
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S+QSE K SV +R + + ++W+W+
Sbjct: 226 STQSELKASVVERFNRTLKTWMWR 249
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SETK SV +R + + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SETK SV +R + + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S+QSE K SV +R + + ++W+W+
Sbjct: 59 STQSELKASVVERFNRTLKTWMWR 82
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SETK SV +R + + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 145 DAYSESTAWIATYMAGVLKVSNIICVIFSLLALGLR 38
D SE AT+ AG L + +IC+++ LLA R
Sbjct: 1839 DEESEMFRQAATWSAGALGILTVICLLYELLARSRR 1874
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.5 bits (63), Expect = 2.6
Identities = 32/137 (23%), Positives = 48/137 (35%), Gaps = 3/137 (2%)
Frame = +1
Query: 130 SHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRT---PSCVWT*PVATSQTT**RFSQNV 300
+H T P PVS P P Q P R P T P V +Q +
Sbjct: 1455 THMTTPTKTPVSSPTPVPTKPQQEPEKRDLPLPTGGLPPTVRPDERKLTQNPAPSAPEG- 1513
Query: 301 VTRSPPPPSVKSFATSRRNSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSV 480
SP PS +S ++ N L TN+P ++ + S ++ +
Sbjct: 1514 KPGSPGQPSRQSASSETTNEKLLPGKQSPGASSDTELKGTPSVTNTPQLQGTSSASESTQ 1573
Query: 481 AQRLSSSPRSWVWKLTA 531
Q+ S + +S TA
Sbjct: 1574 TQQSSQTTQSTTPTATA 1590
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 10 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSH 135
ST + P +P PT S P+THP T S P +H
Sbjct: 112 STPTTHPHIPHASTPTTHPHITHASTPTTHPHITHASTPTTH 153
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +1
Query: 10 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 189
ST + P + PT S P+THP T S P +H P + S P + Y
Sbjct: 124 STPTTHPHITHASTPTTHPHITHASTPTTHPHITHASTPTTH---PHIAHASTTHPYITY 180
Query: 190 ---PTQYP 204
PT +P
Sbjct: 181 ASTPTTHP 188
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 88 PSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTP 222
P+T PP P + PVV +P V PT+ PSTR P
Sbjct: 99 PTTVPPPVVTDAPTT-VPPPVVTDAPTTVPPPVQPTEPPSTRPPP 142
>SB_38098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 193 STRSELKSSVVERFNRTLKTWIWR 216
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = +2
Query: 365 RCARLRAGDGHRCLQQLPREVLRTPRRSSHHNRKRKVPLPRGSLPALVLGYGS*RHPRND 544
R R R+ + L+ PR+ RTPR+ S RKR +GS R PR +
Sbjct: 195 RSPRKRSRSPRKMLRS-PRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRS----RSPRRN 249
Query: 545 IQFHHEV*RXHP*RLVRQH 601
Q H E R H R +H
Sbjct: 250 SQRHKERSRYHRSRSRSRH 268
>SB_39041| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1164
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S+++ETK SV +R + + + W+W+
Sbjct: 100 STKNETKASVVERFNRTFKGWMWR 123
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S+++ETK SV +R + + + W+W+
Sbjct: 902 STKNETKASVVERFNRTFKGWMWR 925
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 39 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 167
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 348 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 488
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_50176| Best HMM Match : RCSD (HMM E-Value=4.9)
Length = 396
Score = 28.7 bits (61), Expect = 4.5
Identities = 42/170 (24%), Positives = 58/170 (34%), Gaps = 3/170 (1%)
Frame = +1
Query: 4 PRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAM 183
P + +S + PST K T+ R P T S T V P+
Sbjct: 147 PSTVKSAQVRTPSTVKSTQVRTPSTVKSAQVRTPSTVKSAQVR--TPGTVKSAQVRTPST 204
Query: 184 VYPTQY--PST-RVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSVKSFATSRR 354
V Q PST + RTPS V + V T T + +Q + V++ +T
Sbjct: 205 VKSAQVRTPSTVKSAQVRTPSTVKSAQVRTPGTV--KSAQVRTPSTVKSAQVRTPSTVIS 262
Query: 355 NSATLRSTXXXXXXXXXXXXXXXXXTNSPTVKSSQSETKGSVAQRLSSSP 504
ST TVKS+Q T G+V S+P
Sbjct: 263 AQVRTPSTVKSAQVRTPSTVKSAQVRTPSTVKSAQVRTPGTVKSTQVSTP 312
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWKLTASTKRH 546
S++SE K SV +R + + ++W+W+ + H
Sbjct: 724 STRSELKASVVERFNRTLKTWMWRWFTYKETH 755
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -2
Query: 190 DTPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLLALG--LRGASVSKT 17
+TPSP + P PDA TAW + L+ S + V S G LRGA K
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 16 G 14
G
Sbjct: 147 G 147
>SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)
Length = 1803
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 628 STRSELKASVVERFNRTLKTWMWR 651
>SB_56732| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 236
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 54 STRSELKASVVERFNRTLKTWMWR 77
>SB_51082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 232 STRSELKASVVERFNRTLKTWMWR 255
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 1475 STRSELKASVVERFNRTLKTWMWR 1498
>SB_35781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 91 STRSELKASVVERFNRTLKTWMWR 114
>SB_34804| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1725
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 485 STRSELKASVVERFNRTLKTWMWR 508
>SB_30663| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 346
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 285 STRSELKASVVERFNRTLKTWMWR 308
>SB_20671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 182 STRSELKASVVERFNRTLKTWMWR 205
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 430 STRSELKASVVERFNRTLKTWMWR 453
>SB_11605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 171 STRSELKASVVERFNRTLKTWMWR 194
>SB_7864| Best HMM Match : rve (HMM E-Value=2.9e-23)
Length = 346
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 206 STRSELKASVVERFNRTLKTWMWR 229
>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1761
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 176 STRSELKASVVERFNRTLKTWMWR 199
>SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3)
Length = 736
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = -2
Query: 190 DTPSPESSTIPVVRPDAYSESTAW---IATYM--AGVLKVSNIICVIFSLLALGLRGASV 26
+TP+P + P PDA TAW TY + L V+ C LRGA+
Sbjct: 90 ETPTPALESAPAAMPDA--TDTAWNRLSVTYFLESEALHVAADACRNGRRHMRTLRGANT 147
Query: 25 SKTGCS 8
K GC+
Sbjct: 148 GKRGCA 153
>SB_39511| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 850
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 54 STRSELKASVVERFNRTLKTWMWR 77
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 238 STRSELKASVVERFNRTLKTWMWR 261
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 139 TRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PVATSQT 273
TR + P+ +P + QYP +PY T + + T P+ T ++
Sbjct: 223 TRMLTVPLITPVPLFLLLHQYPYANCSPYHTSTRMLTVPLITPES 267
>SB_11501| Best HMM Match : rve (HMM E-Value=3.8e-11)
Length = 357
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 451 SSQSETKGSVAQRLSSSPRSWVWK 522
S++SE K SV +R + + ++W+W+
Sbjct: 212 STRSEFKASVVERFNRTLKTWMWR 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,032,188
Number of Sequences: 59808
Number of extensions: 521997
Number of successful extensions: 1890
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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