BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L20 (509 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 37 0.010 U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 33 0.16 AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.16 Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical p... 32 0.28 AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 0.85 Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.5 AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 3.4 Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical pr... 28 4.5 Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical p... 28 4.5 Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 7.9 AF067216-11|AAL02458.1| 707|Caenorhabditis elegans Hypothetical... 27 7.9 >U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical protein K02G10.5 protein. Length = 655 Score = 36.7 bits (81), Expect = 0.010 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +1 Query: 181 IEKCAENCISTPEYNPVCGSDNK-TYKNQGRLFCAQNCGVKVTLARQAPCPSS 336 +E C+ENC +NPVC D+K T+ + CA G+K + C S Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNWTNCGCS 494 >U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical protein F41G3.12 protein. Length = 1483 Score = 32.7 bits (71), Expect = 0.16 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 211 TPEYNPVCGSDNKTYKNQGRL 273 T E+ VCGSD KTY N+ RL Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489 Score = 29.5 bits (63), Expect = 1.5 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 187 KCAENCISTPEYNPVCGSDNKTYKNQ 264 KC+E C + VCG+D KTY N+ Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341 Score = 27.1 bits (57), Expect = 7.9 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 184 EKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQNCGVKVTL 309 + C N + VCGSD TY N L C +K+TL Sbjct: 865 QSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFA-CNIKLTL 905 >AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic protein) homologfamily member protein. Length = 1473 Score = 32.7 bits (71), Expect = 0.16 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +1 Query: 211 TPEYNPVCGSDNKTYKNQGRL 273 T E+ VCGSD KTY N+ RL Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497 Score = 29.5 bits (63), Expect = 1.5 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 187 KCAENCISTPEYNPVCGSDNKTYKNQ 264 KC+E C + VCG+D KTY N+ Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349 >Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical protein C08F11.13 protein. Length = 404 Score = 31.9 bits (69), Expect = 0.28 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Frame = +3 Query: 270 TILCPKLWSQSDFGQASPVPVFIKVILIKYNLYFILIKC----SIHYFVIWKLP*IAVFL 437 T++C L+S+ + SP V + + K+ L+F+LI C SI +VI K+ + VF Sbjct: 307 TVIC--LFSKIVYFHKSPKNVETRFFMKKWYLWFLLINCVIWSSIPLYVIGKVGNV-VFS 363 Query: 438 CNTVFLYLFILC 473 N++F L C Sbjct: 364 PNSLFWALLTFC 375 >AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical protein Y37A1B.11 protein. Length = 691 Score = 30.3 bits (65), Expect = 0.85 Identities = 14/54 (25%), Positives = 28/54 (51%) Frame = +2 Query: 116 KHRYQVKGKHQLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTREDYF 277 + R++ + +H AL +H ++L +R A + CV+++IK + E F Sbjct: 81 EQRHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134 >Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein F29G6.1 protein. Length = 1170 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 Query: 199 NCISTPEYNPVCGSDNKTYKNQGRLFCAQ 285 +C PVCG+DN TY N L C Q Sbjct: 18 DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46 Score = 29.1 bits (62), Expect = 2.0 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +1 Query: 172 RQTIEKCAENCISTPEYNPVCGSDNKTYKN 261 R + + C NC +T E++PVC ++ Y+N Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRN 137 >AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical protein Y26D4A.9 protein. Length = 1435 Score = 28.3 bits (60), Expect = 3.4 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -2 Query: 340 LMKTGTGLAWPKSL*LHNFGHKIVFPGFCKFYYRYHTRGCILVLKCNS 197 L KTG L K + ++NF K + G C RY + KCN+ Sbjct: 950 LKKTGVKLQTIKDIEMYNFIEKGIRGGICNAMLRYSRANNRHLKKCNT 997 >Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical protein ZC376.3 protein. Length = 673 Score = 27.9 bits (59), Expect = 4.5 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%) Frame = +1 Query: 196 ENCISTPEYNPVCGSD-NKTYKN 261 + + T EY P C SD KTYKN Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95 >Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical protein ZC376.3 protein. Length = 673 Score = 27.9 bits (59), Expect = 4.5 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%) Frame = +1 Query: 196 ENCISTPEYNPVCGSD-NKTYKN 261 + + T EY P C SD KTYKN Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95 >Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical protein C34F6.1 protein. Length = 1043 Score = 27.1 bits (57), Expect = 7.9 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +1 Query: 175 QTIEKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQN 288 Q ++ C + T E NP S+ YKN R+ C N Sbjct: 284 QCVDACETETV-TDEANPCKFSNAAKYKNGSRIICGPN 320 >AF067216-11|AAL02458.1| 707|Caenorhabditis elegans Hypothetical protein C35E7.2a protein. Length = 707 Score = 27.1 bits (57), Expect = 7.9 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +3 Query: 270 TILCPKLWSQSDFGQASPVPVFIKVILIKYNLYFILIKCSI 392 T +CP + + F + + +V+L K L+F +IKCS+ Sbjct: 175 TKICPHVSQKIYFCKTTKSESVHQVVLNKLTLHFEIIKCSV 215 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,117,279 Number of Sequences: 27780 Number of extensions: 257863 Number of successful extensions: 548 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 530 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 548 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 988489374 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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