Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L19
(529 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 95 6e-21
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 67 2e-12
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 29 0.43
SPCC191.05c |||nucleoside 2-deoxyribosyltransferase |Schizosacch... 26 3.0
SPAPB1E7.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.3
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 25 5.3
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 25 7.0
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 7.0
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 9.2
SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein 4... 25 9.2
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 95.1 bits (226), Expect = 6e-21
Identities = 43/93 (46%), Positives = 66/93 (70%)
Frame = +2
Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRD 319
+ T+ +MGL+++ R+WV L +N+ D E+SVFETTIR +GGLLS Y L+ D ++ D
Sbjct: 94 LDTMMIMGLDEQVLRAREWVNNSLTWNQDDEEVSVFETTIRILGGLLSSYHLSQDKLYLD 153
Query: 320 KAVEVADALLPAFQTPTGLPYALINPSTKASKQ 418
+AV++AD LL A+ T TGLP + +N T+ S++
Sbjct: 154 RAVDLADRLLAAYNTSTGLPRSNVNLGTRKSRK 186
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 66.9 bits (156), Expect = 2e-12
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 11/96 (11%)
Frame = +2
Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRD 319
+ TL ++G + F++ D V H++F E DT++ VFE TIR +GGLLS + + +
Sbjct: 95 LDTLVVLGDREGFQDAVDKVIHHINF-ERDTKVQVFEATIRILGGLLSSHIFASEEKYGF 153
Query: 320 K-----------AVEVADALLPAFQTPTGLPYALIN 394
+ A E+A+ LLPAF+TPTG+P+A IN
Sbjct: 154 QIPLYKGELLTLATELAERLLPAFRTPTGIPFARIN 189
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 29.1 bits (62), Expect = 0.43
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 170 DEFREGRDWVAEHLHFN--EVDTEL-SVFETTIRFI 268
DEFRE W+ ++L N ++D EL F+T +R++
Sbjct: 287 DEFREQVAWIIDYLLKNRRDIDAELYEPFQTAVRYV 322
>SPCC191.05c |||nucleoside 2-deoxyribosyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 211
Score = 26.2 bits (55), Expect = 3.0
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 284 CYSLTGDTVFRDKAVEVADAL 346
C L GD VFR A+E+ D L
Sbjct: 19 CVYLAGDLVFRPNAIELFDEL 39
>SPAPB1E7.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 178 ELIIESHQVESFDFNINLLITFNSLK*YYL*KTKFETDFK 59
+ I E + E F+IN TF+++ +YL + +FK
Sbjct: 125 DFINEKEEEEDLSFSINAAHTFSNIGTWYLARANEVAEFK 164
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 169 IESHQVESFDFNINLLITFNSLK*Y 95
IE+H+ DF +NLL+ F ++ Y
Sbjct: 143 IEAHKELGIDFPVNLLMCFEGMEEY 167
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +2
Query: 137 EIKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFI 268
E K + E E D + EHL N +L + +TT+ +
Sbjct: 341 EFKRSQYSNPSPEKNENDDQILEHLARNSQKAQLPILQTTVHLL 384
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 302 DTVF-RDKAVEVADALLPAFQTPTGLPYALINPSTKASKQYHWAGPNKYTNPNWVLF 469
D++F + A + ++P+ TP G P +P+ H A P+ T+ + F
Sbjct: 233 DSLFGKRSAAQAMATVVPSVSTPGGTPPRFASPALTVESMVH-AAPSTTTSSRFSKF 288
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 24.6 bits (51), Expect = 9.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 244 YR*LRIDFVEMQMFGDPVSSLSELIIESHQVESFDFNINL 125
Y L I F+E FGD + + ++ E +Q + FN++L
Sbjct: 185 YTRLGIFFIEETHFGDLKNYYTNVVDEVNQKAAAGFNVSL 224
>SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein
4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 24.6 bits (51), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 334 HFHCFIPEHCVTGQRITRQES 272
HFHC I H V+G I + +
Sbjct: 280 HFHCNIHVHSVSGNAIRKSRN 300
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,998,091
Number of Sequences: 5004
Number of extensions: 39492
Number of successful extensions: 109
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 216376042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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