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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L19
         (529 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237...    65   4e-11
04_04_1078 - 30655212-30655289,30655614-30655811,30655916-306560...    61   6e-10
01_06_0881 + 32692345-32692497,32693167-32693286,32693382-326934...    46   1e-05
05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851,666...    44   8e-05
01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,135...    28   4.0  
01_03_0011 + 11630506-11630853                                         28   5.3  
02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931...    27   7.1  
02_05_0113 - 25941189-25941519,25941630-25941925,25942238-259429...    27   7.1  
11_04_0059 + 12981201-12981290,12981548-12981739                       27   9.3  
01_06_1835 + 40223645-40224148,40224893-40225189,40225344-402254...    27   9.3  

>02_05_0701 +
           31022485-31022648,31023569-31023611,31023712-31023777,
           31024007-31024062,31024091-31024190,31024290-31024472,
           31024953-31025001,31025089-31025169,31025209-31025268,
           31025394-31025514,31025612-31025693,31025783-31025868,
           31026011-31026111,31026246-31026387,31026488-31026638,
           31026710-31026937
          Length = 570

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 11/97 (11%)
 Frame = +2

Query: 137 EIKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTG----- 301
           ++ +L ++G   EF  G  W++E+L F +VD  +++FE  IR +GGL+S + L       
Sbjct: 107 KVDSLVVLGNLTEFERGVLWLSENLTF-DVDARINLFECNIRLLGGLISGHILAKEHSSH 165

Query: 302 --DTVFRDKAVEVADAL----LPAFQTPTGLPYALIN 394
             D  ++D+ + +A+ L    LPAF+TPTGLPYA IN
Sbjct: 166 LKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWIN 202


>04_04_1078 -
           30655212-30655289,30655614-30655811,30655916-30656086,
           30656172-30656252,30656464-30656565,30656671-30656779,
           30656900-30656965,30657566-30657630,30658386-30658475,
           30658952-30659123,30659831-30659943,30660046-30660219,
           30660300-30660347,30662041-30662205
          Length = 543

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 35/85 (41%), Positives = 47/85 (55%)
 Frame = +2

Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRD 319
           + TLY+MGL DEF+  R+                        +GGLLS Y L+GD VF +
Sbjct: 150 LDTLYIMGLKDEFQRARE-----------------------VVGGLLSAYDLSGDKVFLE 186

Query: 320 KAVEVADALLPAFQTPTGLPYALIN 394
           KA ++ D LLPA+ TP+G+PY  IN
Sbjct: 187 KAKDITDRLLPAWDTPSGIPYNRIN 211


>01_06_0881 +
           32692345-32692497,32693167-32693286,32693382-32693474,
           32694197-32694283,32696052-32696063,32696553-32696625,
           32697073-32697182,32697608-32697658,32698154-32698242,
           32698518-32698599,32698680-32698793,32699015-32699094,
           32699749-32699884,32700210-32700280,32700363-32700457,
           32700467-32700597,32701009-32701398
          Length = 628

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 21/55 (38%), Positives = 35/55 (63%)
 Frame = +2

Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGD 304
           + TL L+G  + F    +WV +++ F +++  +SVFET IR +GGLLS + +  D
Sbjct: 95  LDTLALLGDKERFDAAVEWVGKNVRF-DINKTVSVFETNIRILGGLLSAHLIASD 148


>05_02_0107 -
           6667944-6668214,6668376-6668524,6668654-6668851,
           6668989-6669250,6669378-6670327,6670907-6671022,
           6671121-6671280
          Length = 701

 Score = 44.0 bits (99), Expect = 8e-05
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDT-ELSVFETTIRFIGGLLSCYSLTG 301
           + T  +MG +D   E   W+ ++L     +  ++++FETTIR +GGLLS Y L+G
Sbjct: 241 LDTAIIMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSG 295


>01_01_0154 -
           1355601-1356102,1356197-1356389,1356465-1356520,
           1356997-1357066,1357188-1357314,1357418-1357695,
           1357908-1358065,1358166-1358246,1358339-1358410,
           1358531-1358602,1358729-1358867,1358987-1360045,
           1360170-1360257
          Length = 964

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +2

Query: 356 FQTPTGLPYALINPSTKASKQYH----WAGPNKYTNPNWVLFIWNSLTLVTSRA 505
           F  PT +    + P   +   Y     W  PN  T P  V+F ++ L ++T+ A
Sbjct: 253 FDAPTAVMQTAVTPRNASGNIYFFWEPWPQPNDPTPPYTVIFHFSELEILTNNA 306


>01_03_0011 + 11630506-11630853
          Length = 115

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 201 PNICISTKSIRSYRYSRQPSGSSVDSCR 284
           P I    ++  SYR+ RQPS SS D  R
Sbjct: 56  PIIVNHYRACNSYRFHRQPSSSSTDRLR 83


>02_05_0118 -
           25991356-25991686,25991797-25992092,25992405-25993109,
           25993197-25993298,25993519-25993846,25994337-25994461,
           25994555-25994628,25995110-25995191,25995278-25995391,
           25995475-25995575,25995663-25995752,25996316-25996562
          Length = 864

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 251 TTIRFIGGLLSCYSLTGDTVFRDKAVE 331
           + +R IG   SC SLTG T+F D  ++
Sbjct: 542 SNLRVIGRSRSCRSLTGSTMFDDMEMD 568


>02_05_0113 -
           25941189-25941519,25941630-25941925,25942238-25942942,
           25943030-25943131,25943352-25943679,25944170-25944294,
           25944388-25944453,25945046-25945109,25945739-25945821,
           25945917-25945943
          Length = 708

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 251 TTIRFIGGLLSCYSLTGDTVFRDKAVE 331
           + +R IG   SC SLTG T+F D  ++
Sbjct: 386 SNLRVIGRSRSCRSLTGSTMFDDMEMD 412


>11_04_0059 + 12981201-12981290,12981548-12981739
          Length = 93

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 346 KCVGHFHCFIPEHCVTGQRI 287
           K V +F C +P HC TG ++
Sbjct: 69  KGVNYFICGVPGHCATGMKL 88


>01_06_1835 +
           40223645-40224148,40224893-40225189,40225344-40225439,
           40225595-40225748,40225773-40226011
          Length = 429

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 216 STKSIRSYRYSRQPSGSSVDSCRVIR*PVTQC 311
           ST+ +RS ++   P+G +  SCR+    V+ C
Sbjct: 300 STEGMRSSKFCLHPAGDTPSSCRLFDAIVSHC 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,498,949
Number of Sequences: 37544
Number of extensions: 246528
Number of successful extensions: 600
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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