BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L19 (529 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237... 65 4e-11 04_04_1078 - 30655212-30655289,30655614-30655811,30655916-306560... 61 6e-10 01_06_0881 + 32692345-32692497,32693167-32693286,32693382-326934... 46 1e-05 05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851,666... 44 8e-05 01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,135... 28 4.0 01_03_0011 + 11630506-11630853 28 5.3 02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931... 27 7.1 02_05_0113 - 25941189-25941519,25941630-25941925,25942238-259429... 27 7.1 11_04_0059 + 12981201-12981290,12981548-12981739 27 9.3 01_06_1835 + 40223645-40224148,40224893-40225189,40225344-402254... 27 9.3 >02_05_0701 + 31022485-31022648,31023569-31023611,31023712-31023777, 31024007-31024062,31024091-31024190,31024290-31024472, 31024953-31025001,31025089-31025169,31025209-31025268, 31025394-31025514,31025612-31025693,31025783-31025868, 31026011-31026111,31026246-31026387,31026488-31026638, 31026710-31026937 Length = 570 Score = 64.9 bits (151), Expect = 4e-11 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 11/97 (11%) Frame = +2 Query: 137 EIKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTG----- 301 ++ +L ++G EF G W++E+L F +VD +++FE IR +GGL+S + L Sbjct: 107 KVDSLVVLGNLTEFERGVLWLSENLTF-DVDARINLFECNIRLLGGLISGHILAKEHSSH 165 Query: 302 --DTVFRDKAVEVADAL----LPAFQTPTGLPYALIN 394 D ++D+ + +A+ L LPAF+TPTGLPYA IN Sbjct: 166 LKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWIN 202 >04_04_1078 - 30655212-30655289,30655614-30655811,30655916-30656086, 30656172-30656252,30656464-30656565,30656671-30656779, 30656900-30656965,30657566-30657630,30658386-30658475, 30658952-30659123,30659831-30659943,30660046-30660219, 30660300-30660347,30662041-30662205 Length = 543 Score = 60.9 bits (141), Expect = 6e-10 Identities = 35/85 (41%), Positives = 47/85 (55%) Frame = +2 Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRD 319 + TLY+MGL DEF+ R+ +GGLLS Y L+GD VF + Sbjct: 150 LDTLYIMGLKDEFQRARE-----------------------VVGGLLSAYDLSGDKVFLE 186 Query: 320 KAVEVADALLPAFQTPTGLPYALIN 394 KA ++ D LLPA+ TP+G+PY IN Sbjct: 187 KAKDITDRLLPAWDTPSGIPYNRIN 211 >01_06_0881 + 32692345-32692497,32693167-32693286,32693382-32693474, 32694197-32694283,32696052-32696063,32696553-32696625, 32697073-32697182,32697608-32697658,32698154-32698242, 32698518-32698599,32698680-32698793,32699015-32699094, 32699749-32699884,32700210-32700280,32700363-32700457, 32700467-32700597,32701009-32701398 Length = 628 Score = 46.4 bits (105), Expect = 1e-05 Identities = 21/55 (38%), Positives = 35/55 (63%) Frame = +2 Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGD 304 + TL L+G + F +WV +++ F +++ +SVFET IR +GGLLS + + D Sbjct: 95 LDTLALLGDKERFDAAVEWVGKNVRF-DINKTVSVFETNIRILGGLLSAHLIASD 148 >05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851, 6668989-6669250,6669378-6670327,6670907-6671022, 6671121-6671280 Length = 701 Score = 44.0 bits (99), Expect = 8e-05 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Frame = +2 Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDT-ELSVFETTIRFIGGLLSCYSLTG 301 + T +MG +D E W+ ++L + ++++FETTIR +GGLLS Y L+G Sbjct: 241 LDTAIIMGADDVVSEASKWIEDNLMKKLSEKGQVNLFETTIRVLGGLLSAYHLSG 295 >01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520, 1356997-1357066,1357188-1357314,1357418-1357695, 1357908-1358065,1358166-1358246,1358339-1358410, 1358531-1358602,1358729-1358867,1358987-1360045, 1360170-1360257 Length = 964 Score = 28.3 bits (60), Expect = 4.0 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = +2 Query: 356 FQTPTGLPYALINPSTKASKQYH----WAGPNKYTNPNWVLFIWNSLTLVTSRA 505 F PT + + P + Y W PN T P V+F ++ L ++T+ A Sbjct: 253 FDAPTAVMQTAVTPRNASGNIYFFWEPWPQPNDPTPPYTVIFHFSELEILTNNA 306 >01_03_0011 + 11630506-11630853 Length = 115 Score = 27.9 bits (59), Expect = 5.3 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 201 PNICISTKSIRSYRYSRQPSGSSVDSCR 284 P I ++ SYR+ RQPS SS D R Sbjct: 56 PIIVNHYRACNSYRFHRQPSSSSTDRLR 83 >02_05_0118 - 25991356-25991686,25991797-25992092,25992405-25993109, 25993197-25993298,25993519-25993846,25994337-25994461, 25994555-25994628,25995110-25995191,25995278-25995391, 25995475-25995575,25995663-25995752,25996316-25996562 Length = 864 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 251 TTIRFIGGLLSCYSLTGDTVFRDKAVE 331 + +R IG SC SLTG T+F D ++ Sbjct: 542 SNLRVIGRSRSCRSLTGSTMFDDMEMD 568 >02_05_0113 - 25941189-25941519,25941630-25941925,25942238-25942942, 25943030-25943131,25943352-25943679,25944170-25944294, 25944388-25944453,25945046-25945109,25945739-25945821, 25945917-25945943 Length = 708 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 251 TTIRFIGGLLSCYSLTGDTVFRDKAVE 331 + +R IG SC SLTG T+F D ++ Sbjct: 386 SNLRVIGRSRSCRSLTGSTMFDDMEMD 412 >11_04_0059 + 12981201-12981290,12981548-12981739 Length = 93 Score = 27.1 bits (57), Expect = 9.3 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 346 KCVGHFHCFIPEHCVTGQRI 287 K V +F C +P HC TG ++ Sbjct: 69 KGVNYFICGVPGHCATGMKL 88 >01_06_1835 + 40223645-40224148,40224893-40225189,40225344-40225439, 40225595-40225748,40225773-40226011 Length = 429 Score = 27.1 bits (57), Expect = 9.3 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +3 Query: 216 STKSIRSYRYSRQPSGSSVDSCRVIR*PVTQC 311 ST+ +RS ++ P+G + SCR+ V+ C Sbjct: 300 STEGMRSSKFCLHPAGDTPSSCRLFDAIVSHC 331 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,498,949 Number of Sequences: 37544 Number of extensions: 246528 Number of successful extensions: 600 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 583 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 597 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1166441080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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