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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L19
         (529 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.)             119   1e-27
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)              73   2e-13
SB_25089| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   4e-05
SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24)          30   1.4  
SB_51957| Best HMM Match : Synaphin (HMM E-Value=0.0055)               29   1.8  
SB_43462| Best HMM Match : VWA (HMM E-Value=5.8e-22)                   29   2.4  
SB_5239| Best HMM Match : AbfB (HMM E-Value=1.9)                       29   3.1  
SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.1  
SB_22182| Best HMM Match : DUF1626 (HMM E-Value=1.7)                   28   5.5  

>SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 555

 Score =  119 bits (287), Expect = 1e-27
 Identities = 52/97 (53%), Positives = 76/97 (78%)
 Frame = +2

Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRD 319
           + TL LMG+N+EF  GR WVA++L+FN+  +++SVFE TIRF+GGLLS Y+L+G+ VF+ 
Sbjct: 219 LSTLKLMGMNEEFERGRKWVAQNLNFNQA-SDISVFEMTIRFLGGLLSAYALSGEEVFKV 277

Query: 320 KAVEVADALLPAFQTPTGLPYALINPSTKASKQYHWA 430
           KA E+ D LLPAF TPTG+P+A++N ++ +   + WA
Sbjct: 278 KAKELGDKLLPAFNTPTGIPWAMVNLASGSGHNWGWA 314



 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +1

Query: 451 SELGTLHLEFTYLSDVTGRDVYRKKV 528
           +E GTLHLEF YLS +TG  VY KKV
Sbjct: 322 AEFGTLHLEFVYLSHITGNQVYAKKV 347


>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
          Length = 758

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 33/68 (48%), Positives = 48/68 (70%)
 Frame = +2

Query: 140 IKTLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRD 319
           + T+ L+ L DEFRE RDWVA  L F++ + ++++FE TIR +GGLLS Y L+ D +F +
Sbjct: 396 LDTMLLLNLKDEFREARDWVANSLSFDK-NVDVNLFEVTIRVLGGLLSAYHLSNDDIFLN 454

Query: 320 KAVEVADA 343
           KAV   +A
Sbjct: 455 KAVSTINA 462



 Score = 35.5 bits (78), Expect = 0.027
 Identities = 15/63 (23%), Positives = 32/63 (50%)
 Frame = +2

Query: 308 VFRDKAVEVADALLPAFQTPTGLPYALINPSTKASKQYHWAGPNKYTNPNWVLFIWNSLT 487
           + + + VE+ D LLP F + +G+P++ +N  T+      W   +  +  + +   +  L+
Sbjct: 521 MLKTRGVELGDRLLPCFNSQSGIPFSDVNLMTRQVHPPRWGPDSSVSEVSTIQLEFRDLS 580

Query: 488 LVT 496
            VT
Sbjct: 581 YVT 583



 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 451 SELGTLHLEFTYLSDVTGRDVYRKKV 528
           SE+ T+ LEF  LS VTG D Y++ V
Sbjct: 567 SEVSTIQLEFRDLSYVTGNDKYKQAV 592


>SB_25089| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 505

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
 Frame = +2

Query: 146 TLYLMGLNDEFREGRDWVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTV--FRD 319
           TL +MG + EF+     V +++HF+   T + VFE  IR +G LLS + +  D +  F D
Sbjct: 167 TLAVMGNSTEFKLAVQHVIDNVHFDRKST-VQVFEANIRVLGSLLSAHMIIKDPLQPFGD 225

Query: 320 K------------AVEVADALLPAF-QTPTGLPYALIN 394
                        A ++A+ L+ AF ++PTG+PY  +N
Sbjct: 226 MSPDDYDDELLTLAHDLANRLVDAFNKSPTGIPYPRVN 263


>SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24)
          Length = 257

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 350 PAFQTPTGLPYALIN 394
           PAF TPTG+PY  +N
Sbjct: 8   PAFDTPTGMPYGTVN 22


>SB_51957| Best HMM Match : Synaphin (HMM E-Value=0.0055)
          Length = 121

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +3

Query: 111 LNVINKLMLKSKLST*WDSMMSSERDETGSPNICISTKSIRSYR 242
           +N + K ++ +KLS+   S+   ++DET S +  +S+K +R  R
Sbjct: 1   MNPLTKALVTNKLSSVTKSIGLDDKDETTSEDAGVSSKEMRKMR 44


>SB_43462| Best HMM Match : VWA (HMM E-Value=5.8e-22)
          Length = 320

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 319 IPEHCVTGQRITRQESTDEPDGCLEYR*LR 230
           +P H +T QRI R    DEPD    +R LR
Sbjct: 90  VPPHMITAQRIQRFFIIDEPDDPSTHRILR 119


>SB_5239| Best HMM Match : AbfB (HMM E-Value=1.9)
          Length = 456

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = +3

Query: 42  NNKRIYLKSVSNLVFHR*YYFKLLNVINKLM 134
           +N RI L++ +NLVF++ +Y ++L +  KLM
Sbjct: 395 DNARIVLEN-NNLVFNKKHYLQVLGIFRKLM 424


>SB_6818| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1784

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 492 TKVSEFQMKSTQFGLVYLLGPAQWYCLLALVEGLMR 385
           T+  EF  +++++G   L    + YCL   +E LMR
Sbjct: 241 TEFVEFSPQTSRYGFTLLAAKIRLYCLRTSIEPLMR 276


>SB_22182| Best HMM Match : DUF1626 (HMM E-Value=1.7)
          Length = 357

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +2

Query: 143 KTLYLMGLNDEFREGRDWVAEHLHFNEVDTELS 241
           KT++  G  + F++G+ W+ +   + E+D  +S
Sbjct: 185 KTIFFSGAREIFKQGQRWLTQAKEYYELDGHVS 217


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,731,459
Number of Sequences: 59808
Number of extensions: 293540
Number of successful extensions: 676
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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