SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L19
         (529 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.9  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   7.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   7.8  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 422 HWAGPNKYTN-PNWVLFIWNSLTL 490
           HW  P+  TN PN +L+  +SL L
Sbjct: 302 HWQLPHNSTNPPNILLYYRDSLAL 325


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +2

Query: 389 INPSTKASKQYHWAGPNKYTNPNWVLF----IWNSL 484
           +NP+ K+    H AGP K    +   F     WNS+
Sbjct: 515 LNPNEKSLHYLHIAGPGKIQMDSSTNFGREDFWNSI 550


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +2

Query: 389 INPSTKASKQYHWAGPNKYTNPNWVLF----IWNSL 484
           +NP+ K+    H AGP K    +   F     WNS+
Sbjct: 515 LNPNEKSLHYLHIAGPGKIQMDSSTNFGREDFWNSI 550


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 16/72 (22%), Positives = 34/72 (47%)
 Frame = +2

Query: 194 WVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRDKAVEVADALLPAFQTPTG 373
           WV+  L  + V   +S+  TT+  +    S  + +   V   KA+++   +   F     
Sbjct: 260 WVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFVFGAL 319

Query: 374 LPYALINPSTKA 409
           L +AL+N ++++
Sbjct: 320 LEFALVNYASRS 331


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 16/72 (22%), Positives = 34/72 (47%)
 Frame = +2

Query: 194 WVAEHLHFNEVDTELSVFETTIRFIGGLLSCYSLTGDTVFRDKAVEVADALLPAFQTPTG 373
           WV+  L  + V   +S+  TT+  +    S  + +   V   KA+++   +   F     
Sbjct: 260 WVSFWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFVFGAL 319

Query: 374 LPYALINPSTKA 409
           L +AL+N ++++
Sbjct: 320 LEFALVNYASRS 331


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 217 QRSRYGAIGIRDNHPVH 267
           +R  YG +   DNH VH
Sbjct: 266 RRKNYGGVYHLDNHHVH 282


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 340 VGHFHCFIPEHCVTGQRITRQESTDEPDGCL 248
           V  F C+ P H      +  Q S D+P+  L
Sbjct: 292 VAFFICWAPFHAQRLLAVYAQNSKDKPEDVL 322


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 359  QTPTGLPYALINPSTKASKQYHW 427
            Q P   P   +  ST +S   HW
Sbjct: 1402 QVPPSAPVLYVTSSTSSSILLHW 1424


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 359  QTPTGLPYALINPSTKASKQYHW 427
            Q P   P   +  ST +S   HW
Sbjct: 1398 QVPPSAPVLYVTSSTSSSILLHW 1420


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 63  KSVSNLVFHR*YYFKLLNVINKLMLKSK 146
           +++SN  +H   + +L N  NK+ L+S+
Sbjct: 3   RNISNYSYHDEKFKQLRNEDNKIDLRSR 30


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 63  KSVSNLVFHR*YYFKLLNVINKLMLKSK 146
           +++SN  +H   + +L N  NK+ L+S+
Sbjct: 3   RNISNYSYHDEKFKQLRNEDNKIDLRSR 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,354
Number of Sequences: 438
Number of extensions: 2828
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -