BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L18 (560 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 31 0.83 07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 30 1.5 05_03_0033 - 7585267-7586028 28 4.4 07_03_0632 - 20112297-20116562 28 5.9 >12_02_0370 + 18139557-18140469,18140561-18140704,18140804-18140956, 18141032-18141147,18141231-18141398,18142110-18142334, 18142458-18142577 Length = 612 Score = 30.7 bits (66), Expect = 0.83 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 58 EPQPEERPAVRSSAAPPKVDDSKDFPSLS*TCSEP 162 +PQPE +PA S PP+ S P+ S T +P Sbjct: 74 QPQPEPQPAAPSQPPPPQEQPSPPPPASSNTTQQP 108 >07_03_0482 + 18589573-18589728,18589889-18590065,18590518-18590688, 18590913-18591029,18591614-18591742,18592210-18592311, 18592412-18592498,18592585-18592638,18594880-18595016, 18595181-18595235,18596133-18596188,18596275-18596334, 18596442-18596529,18596634-18597371,18597451-18597511, 18598301-18598403,18599180-18599311,18599393-18599477 Length = 835 Score = 29.9 bits (64), Expect = 1.5 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 441 YCSSEFKIKTYNNPPPLVNFTWHVTT 364 YCSS + YN+P +++FT HV T Sbjct: 380 YCSSTTRFPRYNDPYKILDFTDHVWT 405 >05_03_0033 - 7585267-7586028 Length = 253 Score = 28.3 bits (60), Expect = 4.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +1 Query: 58 EPQPEERPAVRSSAAPPKVDDSKDFP 135 EPQPE +P + +AP K S +P Sbjct: 228 EPQPESKPEPKPESAPKKETPSSAYP 253 >07_03_0632 - 20112297-20116562 Length = 1421 Score = 27.9 bits (59), Expect = 5.9 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = -3 Query: 225 NNGRYNI*FVTLSYFEKGEDRRLTASLAER 136 + G+YN+ LS F++G+ + L ASL E+ Sbjct: 868 SRGKYNLYGKELSQFDRGQKQPLQASLVEK 897 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,011,636 Number of Sequences: 37544 Number of extensions: 232962 Number of successful extensions: 662 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 641 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 662 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1281410928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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