BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L18 (560 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_11667| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-14) 29 2.6 SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5 SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5 SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 6.0 >SB_11667| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-14) Length = 348 Score = 29.1 bits (62), Expect = 2.6 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +2 Query: 446 CIWIYHNSSFYHIVITAYD 502 C++++ SS YH++I YD Sbjct: 119 CVYVFSGSSLYHLLIVTYD 137 >SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1255 Score = 28.3 bits (60), Expect = 4.5 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = -2 Query: 136 RGSPCCHPPSEVQHSSALQDVPPAGALHAFPDR 38 +G PC H EV H LQD PP L P R Sbjct: 211 KGRPCKHVWPEV-HGHLLQDAPPKAPLGQPPPR 242 >SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 730 Score = 28.3 bits (60), Expect = 4.5 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +1 Query: 61 PQPEERPAVRSSAAPPKV 114 PQP++ PA R SA PP V Sbjct: 398 PQPQKPPATRPSATPPPV 415 >SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) Length = 1127 Score = 27.9 bits (59), Expect = 6.0 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -2 Query: 124 CCHPPSEVQHSSALQDVPPAGALHAFPDRVRA---HGLCH 14 CC S H +++ + PP G+ A P R A H LCH Sbjct: 608 CCWQCSRC-HGNSISNSPPNGSCQACPSRYWADDNHTLCH 646 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,464,204 Number of Sequences: 59808 Number of extensions: 280778 Number of successful extensions: 630 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 627 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1312894764 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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