Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L18
         (560 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11667| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-14)                 29   2.6  
SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.5  
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   4.5  
SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)                 28   6.0  

>SB_11667| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-14)
          Length = 348

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 446 CIWIYHNSSFYHIVITAYD 502
           C++++  SS YH++I  YD
Sbjct: 119 CVYVFSGSSLYHLLIVTYD 137


>SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1255

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = -2

Query: 136 RGSPCCHPPSEVQHSSALQDVPPAGALHAFPDR 38
           +G PC H   EV H   LQD PP   L   P R
Sbjct: 211 KGRPCKHVWPEV-HGHLLQDAPPKAPLGQPPPR 242


>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 730

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 61  PQPEERPAVRSSAAPPKV 114
           PQP++ PA R SA PP V
Sbjct: 398 PQPQKPPATRPSATPPPV 415


>SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 1127

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -2

Query: 124 CCHPPSEVQHSSALQDVPPAGALHAFPDRVRA---HGLCH 14
           CC   S   H +++ + PP G+  A P R  A   H LCH
Sbjct: 608 CCWQCSRC-HGNSISNSPPNGSCQACPSRYWADDNHTLCH 646


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,464,204
Number of Sequences: 59808
Number of extensions: 280778
Number of successful extensions: 630
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)