Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L17
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    91   9e-21
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   4.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   4.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 90.6 bits (215), Expect = 9e-21
 Identities = 44/109 (40%), Positives = 68/109 (62%)
 Frame = +3

Query: 72  SDEEAKVLRSDYSQSPEGDFSYAYETENGISGQAQGKVKSLGKDEIALEVSGSSQYKSPE 251
           +D++A +       + +G++   +ET NGIS Q  G+ K +  +E  +   GS  Y +P+
Sbjct: 23  ADKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVD-NETPVVSQGSDSYTAPD 81

Query: 252 GEVVSLTYIADENGYQPQGSHLPTTPAPLPVPEHILRALAYIAEHPYKE 398
           G+ VS+TY+ADENG+Q QGSH+PT P   P+P  I RAL + A HP ++
Sbjct: 82  GQQVSITYVADENGFQVQGSHIPTAP---PIPPEIQRALEWNAAHPEED 127


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 389 GMLSDVSESTEDMLGYRQRCGG 324
           G +SD+ E  E    YR++C G
Sbjct: 24  GEISDIDEFREMTSKYRKKCIG 45


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +3

Query: 300 PQGSHLPT--TPAPLPVPEHILRA 365
           P+G  LPT  TP P  V + + RA
Sbjct: 151 PRGGSLPTPVTPTPTTVQQLLRRA 174


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 384  AQRCKREHGGYARVPAEVRG 325
            +Q   R++G Y+RVP++  G
Sbjct: 1777 SQSMPRQNGRYSRVPSQGGG 1796


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,607
Number of Sequences: 438
Number of extensions: 3470
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)