Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L15
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 70 9e-13
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 52 3e-07
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 52 3e-07
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 31 0.38
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 31 0.50
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 30 1.2
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 30 1.2
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 29 2.0
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 2.0
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.7
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 3.6
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 28 4.7
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 6.2
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 27 6.2
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 27 8.2
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 70.1 bits (164), Expect = 9e-13
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 111 PPPLCICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 290
PPP C C + PVCG+D TY N C C + + T C+ C
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCD---KKECEKVGT 71
Query: 291 PVCGSNGKTYANKC---SLECTQKIIPSLKME--HDGECQGAKLASLHPCICTREKDPVC 455
P+C + G+T+ N C +C K L + H G C H C T E DPVC
Sbjct: 72 PICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCSSKDCN--HNCTNT-EFDPVC 128
Query: 456 GSDGVTYRQSVPLKMR 503
++G YR +MR
Sbjct: 129 DTNGSVYRNLCVFQMR 144
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Frame = +3
Query: 129 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSN-MTIVKNTACEVGIPCY--CTLEYA 290
C +SPVC S G T++N C F C ++T + +TI K C C C EY+
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYS 877
Query: 291 PVCGSNGKTYANKCSLECTQKIIPS-------LKMEHDGECQGAKLASLHPCICTREKDP 449
PVC SNG+ N+C L+ + ++ + L ++DGEC + C + P
Sbjct: 878 PVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-----CRIENCDIS-VFSP 931
Query: 450 VCGSDGVTYRQSVPLKMRVTFQTK 521
VC ++GVT+ + Q K
Sbjct: 932 VCDTEGVTHANMCLMDQNACIQMK 955
Score = 48.8 bits (111), Expect = 2e-06
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +3
Query: 129 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN 308
C Y P+CG++G T+ N C +K+ S + ++ + C +++PVC S
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSL--QKEICESANSTIEVAYTGMCCDTNCPSDFSPVCDSK 829
Query: 309 GKTYANKCSLECTQKIIPS-----LKMEHDGECQGAKLASLHPCICTREKDPVCGSDG 467
G T+ N C + I L ++ C K + C +E PVC S+G
Sbjct: 830 GSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECN---NACPKEYSPVCASNG 884
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 120 LCICGKIYSPVCGSDGKTYENPCEFY---CEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 290
L C K PVC S G+T+++ C F+ C DK H+ T + P CT E +
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELS 1129
Query: 291 PVCGSNGKTYANKC 332
+C + Y N C
Sbjct: 1130 VICDQHENIYRNSC 1143
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Frame = +3
Query: 129 CGKIYSPVCGSDGKTYENPCE---FYCEKDKTH-SNMTIVKNTACEVG----IPCYCTLE 284
C K + PVC + +T++N C+ F C+ +K S + I + AC I C +
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 285 YAPVCGSNGKTYANKCSL----------ECTQKIIPSLKMEHDGECQGAKLASLHPCICT 434
P+C + T+ CS E ++++ +K H+ Q + P C+
Sbjct: 317 KIPICDNRNMTHPTLCSFIQYNCEARNNEDEERVLVHIKSCHERSPQFTLKDEICPRTCS 376
Query: 435 REKDPVCGSDGVTYR 479
R+ PVC T++
Sbjct: 377 RDVKPVCDEANNTHQ 391
Score = 41.1 bits (92), Expect = 5e-04
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = +3
Query: 147 PVCGSDGKTYENPCEFYCEK----DKTHS-NMTIVKNTACEVGIPCYCTLEYAPVCGSNG 311
PVC S G + N CEF + K H ++ +N + CT + P+C S+
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHPICASDF 602
Query: 312 KTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDP 449
TY N C + + L++ G+C L S PC E P
Sbjct: 603 STYENLCQFRKQKCLDSELEVLFKGKCSEC-LDS--PCALPAENSP 645
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 273 CTLEYAPVCGSNGKTYANKCSL--ECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKD 446
C Y P+CG+NG T+ N CSL E + ++++ + G C C +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTN--------CPSDFS 823
Query: 447 PVCGSDGVTYR 479
PVC S G T++
Sbjct: 824 PVCDSKGSTHQ 834
Score = 36.3 bits (80), Expect = 0.013
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Frame = +3
Query: 147 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE-VGIPCYCTLEYAP----VCGSNG 311
P+C SD TYEN C+F +K + K E + PC E +P VC +
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSPDESFVCLEDQ 655
Query: 312 KTYANKCSLECTQKIIP-----SLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTY 476
T + C + I +L +++ G C + C T + DPVC G T+
Sbjct: 656 ST-KSLCEYQMLSCIFERGYGVNLTVQYIGVC----CPPVESC-DTEKPDPVCTDSGATF 709
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Frame = +3
Query: 150 VCGSDGKTYENPCEFYCEK--DKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYA 323
VC S+G+T+ N C + + +T S T+ E C PVC S G+T+
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCDSRGRTHD 1089
Query: 324 NKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPVCGSDGVTYRQS 485
+ C ++ I + ++ + P CT E +C YR S
Sbjct: 1090 SLCHFHNSKCIFDKIHTQNTTLTLDYQ-GKCCPAGCTDELSVICDQHENIYRNS 1142
Score = 34.3 bits (75), Expect = 0.054
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 273 CTLEYAPVCGSNGKTYANKCSLECTQKIIPS----LKMEHDGECQGAKLASLHPCICTRE 440
C + PVC S G + N C ++ I S + + + C +K A PC T +
Sbjct: 537 CPTDGQPVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCI-SKEACQMPC--TDD 593
Query: 441 KDPVCGSDGVTY 476
K P+C SD TY
Sbjct: 594 KHPICASDFSTY 605
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 429 CTREKDPVCGSDGVTYRQSVPLKMRV 506
C DP+CG++GVT+ + L+ +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQKEI 797
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 52.0 bits (119), Expect = 3e-07
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
Frame = +3
Query: 111 PPPLCICGKIYSPVCGSDGK---TYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTL 281
P C C PVC +G TY N C F C ++ + + + + C YC +
Sbjct: 21 PNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR---YCNM 77
Query: 282 EYAPVCGSNGKTYANKCSLECTQKIIPSLKMEH-DGECQGAKLASLHPCICTREKDPVCG 458
PVC S G+ Y C E Q I L H + K + P C E +PVC
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAP--CPTEWNPVCD 134
Query: 459 SDGVTY 476
G T+
Sbjct: 135 KKGQTH 140
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Frame = +3
Query: 129 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVC 299
C PVC S+G+ Y+ CEF C + K N + ++ + C E+ PVC
Sbjct: 75 CNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPCPTEWNPVC 133
Query: 300 GSNGKTYANKCSL---ECTQK--IIPSLKMEHDGEC 392
G+T+AN C+ +C K + SL++++ G C
Sbjct: 134 DKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVC 169
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 267 CYCTLEYAPVCGSNGK---TYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTR 437
C C E PVC G TY+NKC +C Q+ L + ++G C A+ C
Sbjct: 25 CSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR-------YCNM 77
Query: 438 EKDPVCGSDGVTYRQSVPLKMRVTFQTK 521
+ PVC S+G Y+ + R + K
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEERQCIEFK 104
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 120 LCICGKIYSPVCGSDGKTYENPCEFYCEK 206
+C G+ VC S+G T+ + C FY K
Sbjct: 173 MCSAGQTSLTVCDSEGNTHTDICSFYIAK 201
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 51.6 bits (118), Expect = 3e-07
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 47/178 (26%)
Frame = +3
Query: 129 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGI--------------- 263
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 456
Query: 264 -----PCY---CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA-- 410
C CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 457 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKE 516
Query: 411 -------------SLHPCIC--------TREKDPVCGSDGVTYRQSVPLKMRVTFQTK 521
C C E VCG+DGVTY +K Q+K
Sbjct: 517 KCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 574
Score = 46.0 bits (104), Expect = 2e-05
Identities = 46/163 (28%), Positives = 62/163 (38%), Gaps = 47/163 (28%)
Frame = +3
Query: 150 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTAC-EVGIPCY------------------ 272
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 330 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRTA 389
Query: 273 -------CTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHP 422
C PVC +NG+T+ N+C ++ C K + +K++H G C A+
Sbjct: 390 ECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDS 447
Query: 423 C------------------ICTREKDPVCGSDGVTYRQSVPLK 497
C CT E VCGSDG TY L+
Sbjct: 448 CKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 490
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +3
Query: 144 SPVCGSDGKTYENPCEFYCEKDKTHSNMTI--------------VKNTACEVGI----PC 269
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 317
Query: 270 ----YCTLEYAPVCGSNGKTYANKCSLE 341
CT+ A VCG++GKTY N+C L+
Sbjct: 318 KCSEQCTMNSAHVCGTDGKTYLNECFLK 345
Score = 36.3 bits (80), Expect = 0.013
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 47/167 (28%)
Frame = +3
Query: 117 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTA------------- 248
P C+C + VCGSDGKTY N C N+ + N+A
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 520
Query: 249 ---CEVG------------IPCYCTLEYAPVCGSNGKTYANKCSLE---CTQK--IIPSL 368
C VG P Y E VCG++G TY+++C ++ C Q ++ +
Sbjct: 521 YSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAF 580
Query: 369 KMEHDG----ECQGAKLASLHPCICTRE--KDP-----VCGSDGVTY 476
+ + D +C+ + C+C+ +P +CG +GV Y
Sbjct: 581 EGKCDECLHVQCRYGEECRSGVCVCSYNCPANPPLSARICGENGVLY 627
Score = 34.7 bits (76), Expect = 0.041
Identities = 37/138 (26%), Positives = 51/138 (36%), Gaps = 24/138 (17%)
Frame = +3
Query: 180 NPCE-FYCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSLE 341
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 216 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLR 275
Query: 342 ---CTQKIIPSLK-MEHDGECQGAKLASLHPC--------------ICTREKDPVCGSDG 467
C K ++K C G K + C CT VCG+DG
Sbjct: 276 HHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDG 335
Query: 468 VTYRQSVPLKMRVTFQTK 521
TY LK+ + K
Sbjct: 336 KTYLNECFLKLAACKEQK 353
Score = 32.3 bits (70), Expect = 0.22
Identities = 39/160 (24%), Positives = 54/160 (33%), Gaps = 45/160 (28%)
Frame = +3
Query: 150 VCGSDGKTYENPCEFYCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 287
VCG+DG TY + C + +K H + ++ + C G C C Y
Sbjct: 551 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 608
Query: 288 --------APVCGSNGKTYANKCSLECT--QKIIPSLKME----HDGECQGAKLASLHPC 425
A +CG NG Y + C L+ QK P +M H + PC
Sbjct: 609 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPPSHCHSSKTSFPDFKVRRPC 668
Query: 426 IC-----------------TREKDPVCGSDGVTYRQSVPL 494
C P+CGSDG+ Y L
Sbjct: 669 ACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHL 708
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 117 PLCICGKIYSPVCGSDGKTYENPC 188
P C Y P+CGSDG Y N C
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQC 706
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 150 VCGSDGKTYENPCE 191
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 294 VCGSNGKTYANKCSLE 341
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 51.6 bits (118), Expect = 3e-07
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 47/178 (26%)
Frame = +3
Query: 129 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGI--------------- 263
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 464
Query: 264 -----PCY---CTLEYAPVCGSNGKTYANKCSLECTQKII-PSLKMEHDGECQGAKLA-- 410
C CT E+ VCGS+GKTY+N+C L+ + ++ ++++ C+ KL
Sbjct: 465 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKE 524
Query: 411 -------------SLHPCIC--------TREKDPVCGSDGVTYRQSVPLKMRVTFQTK 521
C C E VCG+DGVTY +K Q+K
Sbjct: 525 KCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSK 582
Score = 46.0 bits (104), Expect = 2e-05
Identities = 46/163 (28%), Positives = 62/163 (38%), Gaps = 47/163 (28%)
Frame = +3
Query: 150 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTAC-EVGIPCY------------------ 272
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 338 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKPDRTA 397
Query: 273 -------CTLEYAPVCGSNGKTYANKCSLE---CTQKIIPSLKMEHDGECQGAKLASLHP 422
C PVC +NG+T+ N+C ++ C K + +K++H G C A+
Sbjct: 398 ECECPNRCEDVMRPVCATNGETFDNECEMKKKSCETKSM--IKVKHQGTCGIGVCATFDS 455
Query: 423 C------------------ICTREKDPVCGSDGVTYRQSVPLK 497
C CT E VCGSDG TY L+
Sbjct: 456 CKKPQVCVVVDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 498
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +3
Query: 144 SPVCGSDGKTYENPCEFYCEKDKTHSNMTI--------------VKNTACEVGI----PC 269
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 325
Query: 270 ----YCTLEYAPVCGSNGKTYANKCSLE 341
CT+ A VCG++GKTY N+C L+
Sbjct: 326 KCSEQCTMNSAHVCGTDGKTYLNECFLK 353
Score = 36.3 bits (80), Expect = 0.013
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 47/167 (28%)
Frame = +3
Query: 117 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTA------------- 248
P C+C + VCGSDGKTY N C N+ + N+A
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 528
Query: 249 ---CEVG------------IPCYCTLEYAPVCGSNGKTYANKCSLE---CTQK--IIPSL 368
C VG P Y E VCG++G TY+++C ++ C Q ++ +
Sbjct: 529 YSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSACHQSKFVMTAF 588
Query: 369 KMEHDG----ECQGAKLASLHPCICTRE--KDP-----VCGSDGVTY 476
+ + D +C+ + C+C+ +P +CG +GV Y
Sbjct: 589 EGKCDECLHVQCRYGEECRSGVCVCSYNCPANPPLSARICGENGVLY 635
Score = 35.1 bits (77), Expect = 0.031
Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 24/120 (20%)
Frame = +3
Query: 150 VCGSDGKTYENPCEFYCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 287
VCG+DG TY + C + +K H + ++ + C G C C Y
Sbjct: 559 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 616
Query: 288 --------APVCGSNGKTYANKCSLECT--QKIIPSLKMEHDGECQGAKLASLHPCICTR 437
A +CG NG Y + C L+ QK P +M C +K + C C R
Sbjct: 617 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMP-PSHCHSSKTSFPDSCQCNR 675
Score = 34.7 bits (76), Expect = 0.041
Identities = 37/138 (26%), Positives = 51/138 (36%), Gaps = 24/138 (17%)
Frame = +3
Query: 180 NPCE-FYCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSLE 341
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 224 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHLR 283
Query: 342 ---CTQKIIPSLK-MEHDGECQGAKLASLHPC--------------ICTREKDPVCGSDG 467
C K ++K C G K + C CT VCG+DG
Sbjct: 284 HHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPECKCSEQCTMNSAHVCGTDG 343
Query: 468 VTYRQSVPLKMRVTFQTK 521
TY LK+ + K
Sbjct: 344 KTYLNECFLKLAACKEQK 361
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3
Query: 150 VCGSDGKTYENPCE 191
VCGSDG TY N CE
Sbjct: 819 VCGSDGTTYSNLCE 832
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 294 VCGSNGKTYANKCSLE 341
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 CICGKIYS-PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE 254
C C + PVC +DG Y +PC C + + ++ +CE
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 267 CYCTLEYAPVCGSN-GKTYANKCSLECT 347
C+C +E+ PVC N G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 353
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 353
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 123 CICGKIYSPVCGSDGK-TYENPCEFYC 200
C C ++PVC D K T+ +PC C
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGC 475
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 243 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 353
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 295 TGAYSKVQ*QGMPTSHAVFFTIVILLCVLSF 203
TGA+ + Q TS+ + FTIV+ +C+ F
Sbjct: 448 TGAFVSFEFQKSATSNGILFTIVLTICMAIF 478
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 123 CICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE 254
C ++Y PVC G Y +PC C + + + ++ T+C+
Sbjct: 538 CENARLY-PVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +3
Query: 273 CTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKDPV 452
CTLE P C +C+ +C Q P + + CQ +A P I T E P
Sbjct: 226 CTLECQPTCQQAVPQCQQQCAPQCQQPSAPQCQ-QCQSACQSPVVA---PQIITLEVVPQ 281
Query: 453 C 455
C
Sbjct: 282 C 282
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +3
Query: 222 NMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGA 401
N T+ N C G V S G+T C P ++ H G C
Sbjct: 290 NETMPYNYYCFCGRMRNPNFRVGEVPHSCGETCGGARKFGCPH---PCTELCHPGPCIEC 346
Query: 402 KLASLHPCICTREKDPV-CGSD 464
KL + C C + K V CGSD
Sbjct: 347 KLFTTKSCNCGKTKKSVRCGSD 368
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +3
Query: 156 GSDGKTYENPC-EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN-----GKT 317
G +GK + + YCE K + T CE +P C + CG N G
Sbjct: 320 GDNGKCIVSQSGQQYCECKKCEFS-----GTNCETTLPDPCQSKQKRACGQNALSPYGVC 374
Query: 318 YANKCSLEC-TQKIIPSLKMEHDGEC 392
Y N CS +C + P K D C
Sbjct: 375 YKNICSDQCFSCACSPGAKSPPDQSC 400
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Frame = +3
Query: 156 GSDGKTYENPC-EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN-----GKT 317
G +GK + + YCE K + T CE +P C + CG N G
Sbjct: 323 GDNGKCIVSQSGQQYCECKKCEFS-----GTNCETTLPDPCQSKQKRACGQNALSPYGVC 377
Query: 318 YANKCSLEC-TQKIIPSLKMEHDGEC 392
Y N CS +C + P K D C
Sbjct: 378 YKNICSDQCFSCACSPGAKSPPDQSC 403
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 238 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 411
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +1
Query: 238 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWN--APKRLYRL*RWNMMANARELNWR 411
+TP P T+P NMPPS + + P WN P L N E+NW+
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDPPPMALKPTTVAQPKQNVMEINWK 903
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 288 HIPRYSSRGCPPRMRCFSRLSYCCVSCPFRSKIHTGSRTSYH 163
HI Y C P + SR +Y C CP R T S ++H
Sbjct: 248 HIMMYHLYICHPEQKMESRPTYFCDRCPMR--FGTESALNFH 287
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +3
Query: 270 YCTLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI--CTREK 443
+C LE P C +C+ +C Q P + + CQ + CI C +
Sbjct: 203 HCNLECQPTCQQAVSQCQQQCAPQCQQPSAPQCQ-QCQSSCQQTQQCQ-QQCIPLCNQPS 260
Query: 444 DPVC 455
P C
Sbjct: 261 APAC 264
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -3
Query: 339 PVNICWRKFFR*SHRRGHIPRYSSRGCPPRMRCFSR----LSYCCVSCPFRSKIHTGSRT 172
PVN W + R+G R C F+ YC +CP ++H+ RT
Sbjct: 243 PVNTWWFDY-----RKGECKRAEHSNCEEHFNSFANQEQCADYCVGTCPNNLEVHSNPRT 297
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 8.2
Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 12/127 (9%)
Frame = +3
Query: 117 PLCICGKIYSPVCGSDGKT-------YENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYC 275
P C C +P CG + +N C C + S T + +C+ C
Sbjct: 162 PTCNCQSACAPACGGNNNNQQIIVVQQDNSCSSNCNNQCSSSCSTPICIQSCQSSCQQAC 221
Query: 276 TLEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGE-----CQGAKLASLHPCICTRE 440
P C CS CT P + + G+ C ++ IC ++
Sbjct: 222 QPTCQPQC-------MPSCSSSCTSNQAPIVIVAQQGDSCSNSCSNQCQSACPTPICVQQ 274
Query: 441 KDPVCGS 461
+ C S
Sbjct: 275 CNSQCQS 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,352,994
Number of Sequences: 27780
Number of extensions: 312792
Number of successful extensions: 951
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -