Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L14
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.42 
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   1.3  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    22   3.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.2  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   5.2  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.0  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.42
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 217 GTRVVAIAISVWYMLICGPSKPPTL 291
           G+ V  I+  VW  LI   +KPPTL
Sbjct: 107 GSEVSCISEEVWSKLIETGNKPPTL 131


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 310 GPNELNTKNDISIRPFKI 363
           GPN +   N++S+  FK+
Sbjct: 20  GPNSVGVSNEVSLPQFKV 37


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 367 FQEVMISDLKQRL-KNHRPFVPALEGVAFEYGFNTAQLESWLK 492
           F    + +L++   + H P V   E +A + G   A+++ W +
Sbjct: 4   FTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 46


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 18  CIIIIFYLSKNSISVCYKIVCNNLFEDN 101
           C+I+I   S   +  C   + NNL  +N
Sbjct: 242 CLILITGKSIVQLLTCLNFITNNLKSEN 269


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 18  CIIIIFYLSKNSISVCYKIVCNNLFEDN 101
           C+I+I   S   +  C   + NNL  +N
Sbjct: 242 CLILITGKSIVQLLTCLNFITNNLKSEN 269


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 310 GPNELNTKNDISIRPFKI 363
           GPN +   +++S+  FK+
Sbjct: 202 GPNSVGVSSEVSLPQFKV 219


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 81  YKQSYNKLI 55
           YKQ YNKL+
Sbjct: 111 YKQKYNKLL 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,644
Number of Sequences: 336
Number of extensions: 2149
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)