Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L14
         (533 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)           28   5.5  
SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)               27   7.3  

>SB_48172| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 547

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 237 CYKRMVYVDLWPIKTSHPRP 296
           C+KR++Y DL P+    PRP
Sbjct: 377 CHKRVLYPDLAPVDQPPPRP 396


>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
          Length = 965

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = -3

Query: 498 PIFEPTL*LCGVEAILKSDAFKGWYEWTVILQSLFQIADHHL----LELDFKRSYTYIIL 331
           P  +P L LCG    +++ A +   E  + ++ ++   D  +    +  D +R YTY+  
Sbjct: 186 PTSKPRLELCGAVLAVQA-AHRVLREIDIAVERVYYYTDSKVVLGYISNDSRRFYTYVAN 244

Query: 330 SIQLIRS 310
            +Q+IRS
Sbjct: 245 RVQIIRS 251


>SB_24473| Best HMM Match : An_peroxidase (HMM E-Value=0)
          Length = 647

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = +1

Query: 193 YYNPRAEFGTRVVAIAISVWYMLICGPSKPPTLDPNEWWGPN-ELNTKNDISIRPFKIKF 369
           Y+  R   G ++  I  S W   I GP     L P   + PN +    N  +   F  +F
Sbjct: 413 YHEARKIVGAQLQHITYSAWIPKIVGPKGMARLGPYPGYNPNTDPTIINAFATAAF--RF 470

Query: 370 QEVMISDLKQRLKNHRPFVPALEG 441
              +I  +  RL +   F+P  EG
Sbjct: 471 GHGLIKPIINRLNS--SFLPIPEG 492


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,837
Number of Sequences: 59808
Number of extensions: 263399
Number of successful extensions: 728
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)