Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L12
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.3  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 165 IEHLLANP*QVVVRRRIL 112
           IEH L++P Q V+  R+L
Sbjct: 127 IEHKLSDPNQCVICHRVL 144


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +1

Query: 136 LLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASS 252
           +L+I   + N  INN   Y Q +  G       N + ++
Sbjct: 463 MLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLNT 501


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +1

Query: 136 LLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASS 252
           +L+I   + N  INN   Y Q +  G       N + ++
Sbjct: 188 MLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLNT 226


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 585 KFGHKYIFEGATTFAKAS 532
           +F H+ +F+ ATT A A+
Sbjct: 17  QFHHQQLFQSATTEAPAA 34


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 585 KFGHKYIFEGATTFAKAS 532
           +F H+ +F+ ATT A A+
Sbjct: 17  QFHHQQLFQSATTEAPAA 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,671
Number of Sequences: 336
Number of extensions: 2750
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)