BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L12 (620 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 31 0.13 SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Ma... 30 0.31 SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 29 0.72 SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 28 0.95 SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 27 1.7 SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 27 1.7 SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 2.2 SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 27 2.9 SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.9 SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 3.8 SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 25 6.7 SPBC19G7.16 |iws1||transcription elongation factor complex subun... 25 6.7 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.8 SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 25 8.8 SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 8.8 SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 8.8 >SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 31.1 bits (67), Expect = 0.13 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = +1 Query: 61 VVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYI 195 ++DYA K + V + DDDL++IS M DI+ AFN I Sbjct: 54 LIDYASKFEKVQLKSAVLKAPFDDDLMKIS-PMIKEDIDIAFNNI 97 >SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual Length = 535 Score = 29.9 bits (64), Expect = 0.31 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +1 Query: 508 FTKYARHWTGLCKCSCAFENIFMAELKSDTVLGLHSW 618 F + R W + F +IFM + + D V G++SW Sbjct: 397 FLLFVRGWLSPLGINRIFGSIFMGKTRQDRVYGMYSW 433 >SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol pyrophosphate synthase |Schizosaccharomyces pombe|chr 3|||Manual Length = 920 Score = 28.7 bits (61), Expect = 0.72 Identities = 22/91 (24%), Positives = 39/91 (42%) Frame = +1 Query: 109 VQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSG 288 ++ T DLL++ +++ + D N A + + + S + D A PEN+ Sbjct: 549 LEQETIPSDLLKVRKDLLD-DSNAAKDTMDKVKKHLKSLLRVGDTARKEF-TWPENMPKP 606 Query: 289 PTIRPFVALFDNYHKNVIRPEFVTPNEETEQ 381 + V YH+ V+R F+ E EQ Sbjct: 607 CEVMQQVVQLMKYHRAVMRENFIILGPEVEQ 637 >SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharomyces pombe|chr 1|||Manual Length = 401 Score = 28.3 bits (60), Expect = 0.95 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 187 NYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPT 294 NY++ +Q K + SK DE S +LLN + PT Sbjct: 139 NYVRFFIQPKLNNTSKLDEISDSLLNAFSKLKEEPT 174 >SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces pombe|chr 1|||Manual Length = 471 Score = 27.5 bits (58), Expect = 1.7 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = +1 Query: 31 LQQIGTVVGGVVDYAKKKSYDDML--RQVQDSTTDDDLLRISEEMFNADINNAFNYIQ 198 L+++G+ GVV A++ D++ +Q+ T DD+ I +E+F N+ N IQ Sbjct: 12 LRKLGSGSFGVVWKARENVSGDIIAIKQIDLETGIDDITDIEQEVFMLSNCNSSNVIQ 69 >SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosaccharomyces pombe|chr 2|||Manual Length = 512 Score = 27.5 bits (58), Expect = 1.7 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -3 Query: 432 HKGTNRSGGEYSVDVRCL 379 H GT+ SGG Y+VDV+ L Sbjct: 444 HHGTSASGGHYTVDVQQL 461 >SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces pombe|chr 1|||Manual Length = 635 Score = 27.1 bits (57), Expect = 2.2 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -3 Query: 606 TKHSIR-LKFGHKYIFEGATTFAKASPVTSVFCEP---NFLQQLDLFIVLIHLSQPFTN 442 T H+++ L FG F GAT + PV+ +P + + D+ ++LI P N Sbjct: 176 TPHNVKILAFGFVNSFSGATDTVRVLPVSQFSLQPWWNDMVSNKDIDLILIPAHVPVHN 234 >SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharomyces pombe|chr 2|||Manual Length = 407 Score = 26.6 bits (56), Expect = 2.9 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 94 DMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQG 213 D+ RQV DL+R+ + F D N F++ + S G Sbjct: 349 DLGRQVNSEAHMVDLVRLKQGSFALDDENCFDFSEFSAPG 388 >SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 687 Score = 26.6 bits (56), Expect = 2.9 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +1 Query: 214 KTSPMSKNDEASSNLLNVPENVWSGPTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYI 393 K + ND + LN+P+ VW+ F++ ++Y K T N E +T Sbjct: 73 KLKDVKLNDINKKSPLNIPDEVWT-----KFISEVNSYDKEK-ENHLSTGNHELRRT--- 123 Query: 394 NTILATGP-IRTLMNFLVSKGLTQMNEYN 477 T L GP + T + L SK T N Y+ Sbjct: 124 -TPLKIGPLLLTRIGLLKSKN-TASNNYS 150 >SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces pombe|chr 1|||Manual Length = 665 Score = 26.2 bits (55), Expect = 3.8 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Frame = +1 Query: 151 EEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPTI-RPFVALFDNY 327 E+ F D + N I Q + P + + L P + + F F+N Sbjct: 178 EDDFEIDPDTDLNSILHRKQNRMDPKASFSSVEQSSLRTPSSAHNDDGFWDDFDIDFNNE 237 Query: 328 HKNVIRPEFVTPNEETEQTTYINTILATGP 417 +++ R + +PN ++ YI++ ++ P Sbjct: 238 TESIFRKKIRSPNTINQKHPYISSTISYQP 267 >SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharomyces pombe|chr 2|||Manual Length = 774 Score = 25.4 bits (53), Expect = 6.7 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +1 Query: 514 KYARHWTGLCKCSCAFENIFMAELKSDTVLGLHSW 618 KY ++W CK + F M +LKS L + W Sbjct: 466 KYRKYWPDFCKAAGVF---CMGDLKSSDSLKVCDW 497 >SPBC19G7.16 |iws1||transcription elongation factor complex subunit Iws1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 428 Score = 25.4 bits (53), Expect = 6.7 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 Query: 76 KKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNA 183 KK+S +D L Q+ DD++LR+ E+M A + +A Sbjct: 173 KKRSNEDNLEQM----ADDEVLRLREQMRLAALRDA 204 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.0 bits (52), Expect = 8.8 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Frame = +1 Query: 4 QQGNTAQNTLQQIGTVVG---GVVDYAKKKSYDDMLRQV---QDSTTDDDLLRISEEMFN 165 Q+G + L+ GT +G G D + DD L ++ +D+ DL Sbjct: 3899 QEGKSNSGELES-GTGLGSGVGAEDITNTLNEDDDLEELANEEDTANQSDLDESEARELE 3957 Query: 166 ADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENV 279 +D+N VS + +N + + ++PE++ Sbjct: 3958 SDMNGVTKDSVVSENENSDSEEENQDLDEEVNDIPEDL 3995 >SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 570 Score = 25.0 bits (52), Expect = 8.8 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +1 Query: 166 ADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSG 288 +DI A NY S+ +T ++ + +V +NVW G Sbjct: 307 SDIRGANNYGWTSILVRTGIFQGDNSPKYSAKHVSDNVWEG 347 >SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccharomyces pombe|chr 2|||Manual Length = 605 Score = 25.0 bits (52), Expect = 8.8 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 Query: 193 IQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPTIRPFVALFD 321 + +S TSP+S + AS LN+P + + PF D Sbjct: 241 LDLSNSNPTSPVSPSSMASRRGLNIPPTLKQAVSETPFSTFSD 283 >SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 299 Score = 25.0 bits (52), Expect = 8.8 Identities = 13/58 (22%), Positives = 24/58 (41%) Frame = +1 Query: 313 LFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTLMNFLVSKGLTQMNEYNEQV 486 + DN + F P E Y + + +RTL N + +T+++E +V Sbjct: 197 MLDNISNHRFGAPFSHPVNRKEAPDYDSLVYKPQDLRTLKNMIKEGNITEVDELYREV 254 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.316 0.131 0.389 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,508,932 Number of Sequences: 5004 Number of extensions: 49960 Number of successful extensions: 160 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 160 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 273658928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
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