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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L12
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654...    72   4e-13
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13...    31   0.97 
11_01_0470 + 3645010-3647686,3647804-3648168                           30   1.7  
12_01_0862 + 8161117-8163913,8164000-8164019                           29   3.9  
02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805     29   3.9  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    28   6.9  
07_01_0791 - 6165069-6165165,6165288-6165346,6165379-6165432,616...    27   9.1  
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741...    27   9.1  
04_03_0774 - 19457218-19457517,19457575-19457673,19457679-194577...    27   9.1  

>04_04_0672 +
           27164628-27164792,27164903-27164965,27165298-27165408,
           27165454-27165537,27166081-27166194,27166901-27167494,
           27167604-27167675,27167761-27167997
          Length = 479

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
 Frame = +1

Query: 232 KNDEASSNLLN-VPENVWSGPTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYINTILA 408
           K D AS  L + + ++V   PT   F AL DNY+ +    E VT  ++ E+  +I  I  
Sbjct: 252 KGDMASETLFSWLGDDVLRKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEVAFIEEIAR 311

Query: 409 TGPIRTLMNFLVSKGLTQMNEYNEQVQLLQKIWFTKYARHWTGLCKCSCAFENIFMAELK 588
           T PI+ L  +LV KG+    +Y +  ++L  +WF  Y R   G    S AFE++F+ E+K
Sbjct: 312 TAPIKYLHRYLVLKGVAS-QDYEDFKRMLTSLWFDLYGR--GGSSSSSSAFEHVFVGEIK 368


>03_01_0016 +
           131141-131236,131743-132043,132125-132341,132440-132773,
           132883-132996,133065-133193,133293-133469,133555-133746,
           134844-134981,135327-135559,135900-136003,136633-136727,
           136817-137053,137801-137922,138252-138354,138750-138826,
           138909-139017,139107-139253,139953-140000,140292-140492,
           140589-140738,140917-141002,141088-141193,141278-141373,
           141759-141911,142647-142819,142923-142986,144056-144193,
           144548-144595,144690-144836,144907-144968,146540-146645,
           147357-147461,147548-147679,147765-147974,148070-148171,
           148261-148398
          Length = 1729

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 172 INNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPTIRPFV 309
           +N A+N +Q  +Q +  P    D   SN++N    +    T+R FV
Sbjct: 455 VNTAYNLLQYEVQSRVFPAILKDATKSNVVNYLWQINPSLTLRGFV 500


>11_01_0470 + 3645010-3647686,3647804-3648168
          Length = 1013

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +1

Query: 151 EEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLL-NVPENVWSGPTIRPFVALFDN 324
           EE+F  + N  + YI  SL GK + +S    ++++L  ++PE ++  PTIR     F+N
Sbjct: 442 EELF-LESNQLYGYIPSSL-GKLNVLSVLSMSNNSLHGSIPEEIFRIPTIRKISLSFNN 498


>12_01_0862 + 8161117-8163913,8164000-8164019
          Length = 938

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +1

Query: 328 HKNVIRPEFVTPNEET-EQTTYINTILATGPIRTLMNFLVSKGLTQMNEYNEQVQLLQKI 504
           H  VI  +    N  T  + T  N+ L+  P+ +L NF     L   N Y  +  L Q  
Sbjct: 771 HDRVIGSDLFEANRLTLMELTLENSRLSIDPLPSLSNFCNLTLLGLFNHYIGETLLFQAE 830

Query: 505 WFTK 516
           WF K
Sbjct: 831 WFPK 834


>02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805
          Length = 456

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 478 EQVQLLQKIWFTKYARHWTGLCKCSCAFENIFMAE 582
           E++  L  IW  K+  H TGLC      +N F+ E
Sbjct: 392 ERIYPLLMIWPPKFPAHLTGLCTLVYLVDNQFLLE 426


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 115 DSTTDDDLLRISEEMFNADINNAFNYIQ 198
           D  T  D L +S EM+  D NN  +Y+Q
Sbjct: 673 DMLTIRDALEVSAEMYKKDPNNVQDYVQ 700


>07_01_0791 -
           6165069-6165165,6165288-6165346,6165379-6165432,
           6165475-6165516
          Length = 83

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 86  ATMTCYVKYRILRRTTTCYGLARRCSMRI 172
           AT+T Y ++  LR+T   +  A RCSM +
Sbjct: 49  ATVTNYGEFNSLRKTVVGWQAASRCSMAV 77


>05_07_0274 -
           28873531-28873644,28873727-28873981,28874111-28874179,
           28874277-28874415,28874511-28875076,28875225-28875326,
           28875425-28875491,28875576-28876072,28876148-28876212,
           28876470-28876567,28876652-28876694,28876870-28876963,
           28877325-28877360,28877454-28877542,28877667-28877788,
           28878193-28878404
          Length = 855

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +1

Query: 193 IQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPTIRPFVALFDNYHKNVIRPEFVTPNE 369
           ++  L+G T P     E S+    VP     GP   P   + DN  +  IRPE +  +E
Sbjct: 440 LEDDLKGATGPKKSETEKSAT---VPLKDGDGPLPPPKPEIPDNEFEKRIRPEVIPASE 495


>04_03_0774 -
           19457218-19457517,19457575-19457673,19457679-19457726,
           19458382-19458482,19458807-19458918,19459132-19459515,
           19459952-19460128
          Length = 406

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 454 LTQMNEYNEQVQLLQKIWFTKYARHWTGLCKC-SCAFENIFMAELKSD 594
           ++Q  ++  ++ LL   WF  + + WT L    S A+  +   +LKSD
Sbjct: 216 ISQKEDFFYRIFLLYADWFRLWEKWWTALSHIRSSAYHVLCTQDLKSD 263


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,929,768
Number of Sequences: 37544
Number of extensions: 300113
Number of successful extensions: 771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

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