BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_L11 (544 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_06_0289 - 22053561-22055666,22055745-22055771 29 2.4 11_04_0094 + 13418604-13418680,13419331-13419400,13420078-134202... 28 4.2 04_01_0332 + 4378111-4378329,4378862-4378997,4379113-4379165,437... 28 4.2 10_08_0393 + 17517511-17517777,17518913-17518987,17519080-175191... 27 7.3 09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 27 7.3 09_06_0264 - 21929086-21931368 27 9.7 08_02_1550 - 27818271-27818618,27818743-27818955,27819079-278195... 27 9.7 >09_06_0289 - 22053561-22055666,22055745-22055771 Length = 710 Score = 29.1 bits (62), Expect = 2.4 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +3 Query: 246 VRWTVEWIAKRLVINNKGLKWCQIMATRFKR 338 VRW EW + LV+ + GL+W ++A ++ Sbjct: 40 VRWWDEWQLRILVLGSLGLQWFLLVAAPMRK 70 >11_04_0094 + 13418604-13418680,13419331-13419400,13420078-13420236, 13420334-13420445,13420530-13420649,13422249-13422406, 13422987-13423217,13424621-13424713,13425088-13425227, 13426331-13426401,13427554-13427637,13427752-13427846 Length = 469 Score = 28.3 bits (60), Expect = 4.2 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +1 Query: 298 ASNGVRSWLLDSNGYTKTKNW-NGYPPSVPLGNINLFGMHSKPSDIY 435 +S+ SW L + K KNW NG ++ +G FG S P DI+ Sbjct: 35 SSSQFYSWCLQTKTQVKVKNWVNGTEGTIVVGLSARFGA-SVPRDIH 80 >04_01_0332 + 4378111-4378329,4378862-4378997,4379113-4379165, 4379286-4379394,4379467-4379603,4379698-4379894, 4379979-4380128,4380233-4380293,4380380-4380500, 4380901-4380991,4381116-4381209,4381446-4381541, 4382176-4382316,4382592-4382642,4383093-4383161, 4384072-4384142,4384244-4384336,4384820-4384910, 4386164-4386235,4387226-4387351,4387537-4387593, 4387926-4388000,4388570-4388658,4388814-4388891, 4389308-4389446,4389868-4389977,4390151-4390250, 4390548-4390655 Length = 977 Score = 28.3 bits (60), Expect = 4.2 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = +1 Query: 298 ASNGVRSWLLDSNGYT-KTKNWNGYPPSVP----LGNINLFGMHSKPSDIYNGT 444 ++NG R+WL+D N T K +W+ P +I+++ +H + ++ T Sbjct: 286 SANGTRTWLVDINSETLKPASWDELSDEKPNLESFSDISIYELHIRDFSAHDST 339 >10_08_0393 + 17517511-17517777,17518913-17518987,17519080-17519133, 17519235-17519300,17519383-17519441,17520143-17520177, 17520527-17520616,17520684-17520730,17520817-17520917, 17521259-17521323,17521819-17522135,17522418-17522481, 17522565-17522740,17523386-17523487,17523704-17523847, 17523937-17524032,17524357-17524458,17524740-17524835 Length = 651 Score = 27.5 bits (58), Expect = 7.3 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -3 Query: 287 DNKPFGYPFDRPADSTCLVPKS 222 DN PF Y + P DS C +P + Sbjct: 429 DNGPFCYGYTLPKDSNCTMPST 450 >09_03_0058 + 11950668-11950701,11951068-11951106,11951586-11951982, 11952016-11952314,11953743-11956795 Length = 1273 Score = 27.5 bits (58), Expect = 7.3 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = +1 Query: 124 NIIGFRKVRGNVEFVRKVLAFVVYEDILKEH 216 N++G + RG+V + V++ V YE + EH Sbjct: 212 NVVGALRARGHVTILAAVVSNVTYECLSPEH 242 >09_06_0264 - 21929086-21931368 Length = 760 Score = 27.1 bits (57), Expect = 9.7 Identities = 10/36 (27%), Positives = 21/36 (58%) Frame = +3 Query: 231 NQARRVRWTVEWIAKRLVINNKGLKWCQIMATRFKR 338 N + V+W EW + LV+ + G++W ++A ++ Sbjct: 3 NVSAAVQWWDEWQLRILVLCSLGIQWFLLLAAPMRK 38 >08_02_1550 - 27818271-27818618,27818743-27818955,27819079-27819597, 27820239-27820357,27820457-27820763,27820840-27820922, 27821027-27821204,27821328-27821401,27822078-27822293, 27822724-27822757 Length = 696 Score = 27.1 bits (57), Expect = 9.7 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +1 Query: 292 TKASNGVRSWLLDSNGYTKTKN-WNGYPPSVPLGNINLFGMHSKPSDIYN 438 T S+ + + GY N W+GYPP V ++ G+ + P+ +YN Sbjct: 155 TMYSSQAQPFYYQGPGYDNPSNEWDGYPPYV-----SVEGLEAGPAVVYN 199 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,442,647 Number of Sequences: 37544 Number of extensions: 274391 Number of successful extensions: 703 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 693 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 703 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1210221432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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