Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L10
         (470 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032627-1|AAH32627.1|  295|Homo sapiens glycine N-methyltransfe...    54   2e-07
AL158815-2|CAI19462.1|  295|Homo sapiens glycine N-methyltransfe...    54   2e-07
AF101477-1|AAF78290.1|  295|Homo sapiens glycine N-methyltransfe...    54   2e-07
AF101475-1|AAF78289.1|  295|Homo sapiens glycine N-methyltransfe...    54   2e-07
X62250-1|CAA44164.1|  263|Homo sapiens liver glycine methyltrans...    46   7e-05

>BC032627-1|AAH32627.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -1

Query: 329 SEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYADFKSIH--EVPVPAFYIHVMEK 171
           S+FRL YYPH L+ FT++L  AF  + +H +  DFK     +  +P ++IHV+++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKR 293



 Score = 35.9 bits (79), Expect = 0.071
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 468 PGHSI*YNCKYPVDIKTSVLVVNGKPKLIALDYCI 364
           PG +I Y      D+ TSVL+VN K  ++ LDY +
Sbjct: 191 PGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTV 225


>AL158815-2|CAI19462.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -1

Query: 329 SEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYADFKSIH--EVPVPAFYIHVMEK 171
           S+FRL YYPH L+ FT++L  AF  + +H +  DFK     +  +P ++IHV+++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKR 293



 Score = 35.9 bits (79), Expect = 0.071
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 468 PGHSI*YNCKYPVDIKTSVLVVNGKPKLIALDYCI 364
           PG +I Y      D+ TSVL+VN K  ++ LDY +
Sbjct: 191 PGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTV 225


>AF101477-1|AAF78290.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -1

Query: 329 SEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYADFKSIH--EVPVPAFYIHVMEK 171
           S+FRL YYPH L+ FT++L  AF  + +H +  DFK     +  +P ++IHV+++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKR 293



 Score = 35.9 bits (79), Expect = 0.071
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 468 PGHSI*YNCKYPVDIKTSVLVVNGKPKLIALDYCI 364
           PG +I Y      D+ TSVL+VN K  ++ LDY +
Sbjct: 191 PGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTV 225


>AF101475-1|AAF78289.1|  295|Homo sapiens glycine
           N-methyltransferase protein.
          Length = 295

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = -1

Query: 329 SEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYADFKSIH--EVPVPAFYIHVMEK 171
           S+FRL YYPH L+ FT++L  AF  + +H +  DFK     +  +P ++IHV+++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKR 293



 Score = 35.9 bits (79), Expect = 0.071
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 468 PGHSI*YNCKYPVDIKTSVLVVNGKPKLIALDYCI 364
           PG +I Y      D+ TSVL+VN K  ++ LDY +
Sbjct: 191 PGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTV 225


>X62250-1|CAA44164.1|  263|Homo sapiens liver glycine
           methyltransferase protein.
          Length = 263

 Score = 46.0 bits (104), Expect = 7e-05
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = -1

Query: 329 SEFRLCYYPHKLSKFTKMLDEAFDNRAKHHIYADFKSIH--EVPVPAFYIHVMEK 171
           S+FRL YYPH L+ FT+    +F  + +H +  DFK     +  +P ++IHV+++
Sbjct: 208 SKFRLSYYPHCLASFTES-PSSFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKR 261



 Score = 35.9 bits (79), Expect = 0.071
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 468 PGHSI*YNCKYPVDIKTSVLVVNGKPKLIALDYCI 364
           PG +I Y      D+ TSVL+VN K  ++ LDY +
Sbjct: 160 PGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTV 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,567,002
Number of Sequences: 237096
Number of extensions: 1055814
Number of successful extensions: 5944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5944
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)