Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L09
(544 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 25 0.32
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 25 0.57
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 1.3
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 1.7
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 2.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 5.3
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 9.2
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 25.4 bits (53), Expect = 0.32
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = +1
Query: 31 IQPCICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQPESNK 210
++P CT + + GS G+ G+P A S+ PC + +QP +
Sbjct: 139 VRPAACTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPCS--INSTSSQPVGTQ 196
Query: 211 V 213
+
Sbjct: 197 I 197
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 24.6 bits (51), Expect = 0.57
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 163 CDNRVKVVENQPESNKVIVVDNNNAPSCACTRNLEPVC 276
C+ + + E++ + D N AP C T+ + P C
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAPDCDPTQCVLPDC 172
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 151 VRCSSSGSTVWRNSTGTG 98
VRC +GST R +TG G
Sbjct: 918 VRCVCAGSTGTRRATGCG 935
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 1.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 115 CATQSNPSLSIEHPGPCDNRVKVVENQPESNKVIVVDNNNAPSCACTRN 261
C + + SL ++H C + NQ K ++ NN P + TR+
Sbjct: 640 CGNKIDTSLFVDHIRQCVGGGTIGSNQRNFLKNALMSNNILPPESPTRD 688
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 163 CDNRVKVVENQPESNKVIVVDNNNAPSCAC 252
C NR+ + ++ P N D+ +C C
Sbjct: 58 CQNRINLCDSSPCLNGATCQDHTTHYTCHC 87
Score = 21.0 bits (42), Expect = 7.0
Identities = 9/30 (30%), Positives = 10/30 (33%)
Frame = +1
Query: 163 CDNRVKVVENQPESNKVIVVDNNNAPSCAC 252
C V P N+ V N N C C
Sbjct: 96 CGEYVDWCSTNPCENQATCVQNKNQYQCLC 125
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 383 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 285
IW + L + +T W+P R+ + L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 383 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 285
IW + L + +T W+P R+ + L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 383 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 285
IW + L + +T W+P R+ + L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 4.0
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 383 IWFFYALQGSCVTTVKWSPPWHRIMHS-LL*VTP 285
IW + L + +T W+P R+ + L VTP
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCERLARTEKLFVTP 499
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 5.3
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +1
Query: 55 EIKQVCGSDGVTYGNPCLLNCATQSNPSLSI 147
+I+ + V GN L C NP+ I
Sbjct: 415 QIRHAFNEETVQPGNSVFLKCIASGNPTPEI 445
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 193 GFPQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 95
G P PS P R S+S T S T C
Sbjct: 73 GAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSC 105
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,328
Number of Sequences: 336
Number of extensions: 2983
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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