Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L09
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   4.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.6  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 374 FYALQGSCVTTVKWSPPWHR 315
           F AL  SC+ T  +  PW R
Sbjct: 519 FQALYQSCLETATFPAPWKR 538


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 301 NECMMRCHGGDHLTVVTH 354
           NE +M+  G + LTV+TH
Sbjct: 606 NEMVMQKEGENELTVLTH 623


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = +1

Query: 145  IEHPGPCDNRVKVVENQPESNKVIVVDNNNAPSCACTRNLEPVCASNGVTYNNE 306
            ++H GP ++ V+  E+   S   +   ++  PSC C+  ++ V   +    N++
Sbjct: 1848 LDH-GPAEDHVEEEEDGTRSAIHMHAAHSLFPSCLCSSVMQIVACLDDAAVNSD 1900


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,298
Number of Sequences: 2352
Number of extensions: 12837
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)