Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L09
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              38   9e-05
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   4.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 37.5 bits (83), Expect = 9e-05
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 250 CTRNLEPVCASNGVTYNNECMMR---CHGGDHLT 342
           C R   PVCASNG  Y N C +    CH G  LT
Sbjct: 110 CPRRHRPVCASNGKIYANHCELHRAACHSGSSLT 143



 Score = 29.9 bits (64), Expect = 0.018
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = +1

Query: 4   ECQEVKVADIQPCICTREI----KQVCGSDGVTYGNPCLLN-CATQSNPSLS 144
           EC+    + I  C+C R+     + VC S+G  Y N C L+  A  S  SL+
Sbjct: 92  ECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLT 143


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -1

Query: 187 PQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 95
           P PS  CR         SGS +W+      C
Sbjct: 47  PIPSYACRGRCSSYLQVSGSKIWQMERSCMC 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,204
Number of Sequences: 438
Number of extensions: 3437
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)