Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L07
(500 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 186 2e-48
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 116 3e-27
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 116 3e-27
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 98 6e-22
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 97 1e-21
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 78 6e-16
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 75 5e-15
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 31 0.13
SPAC30C2.05 |erv14||cornichon family protein Erv14|Schizosacchar... 27 1.6
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 25 6.4
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 186 bits (453), Expect = 2e-48
Identities = 86/149 (57%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 234
YDRA++VFSPDG LLQVEY QEAVR+G+TA E+K+V KLQ +KI
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 235 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 414
++D+HV +AFAGL ADARILI++A++E Q+HKL + DPV++EY+TRY+AG++QKYTQS
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 415 GRRPFGISCLIGGFDY-DGSPHLFQTEPS 498
G RPFG+S LI GFD D +P ++QTEP+
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPA 152
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 116 bits (278), Expect = 3e-27
Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Frame = +1
Query: 43 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKL-QEER 219
MS YD T+FSP+G L QVEYA EA+ A EKK +KL ++E
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 220 TVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQK 399
+ K+ + D+++ A AGLTADA ILIN A+ Q + T + + E + R + LKQ
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG 120
Query: 400 YTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPS 498
YTQ G RPFG+S L G+D+ LFQ+ PS
Sbjct: 121 YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPS 153
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 116 bits (278), Expect = 3e-27
Identities = 59/156 (37%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Frame = +1
Query: 49 ARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVR 228
+ YDR + FSP+G L QVEYA EA++ GSTA EK+ + L E +V
Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVE 65
Query: 229 KICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQ 408
K+ +D H+ A +GLTADAR +I A+++ Q+H+ T ++P +E T+ I L ++ +
Sbjct: 66 KLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGE 125
Query: 409 SNG------RRPFGISCLIGGFDYDGSPHLFQTEPS 498
RPFG++ LI G D G P L+ +EPS
Sbjct: 126 GEDGEERIMSRPFGVALLIAGIDEHG-PQLYHSEPS 160
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 98.3 bits (234), Expect = 6e-22
Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 2/154 (1%)
Frame = +1
Query: 43 MSARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERT 222
M+ +Y ++T FSP+G L+Q+EYA AV G T+ EKK ++L +
Sbjct: 1 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGAS 60
Query: 223 VRKICLLDDHVVMAFAGLTADARILINRAQIECQS--HKLTVEDPVTLEYITRYIAGLKQ 396
+ K+C + + M ++G+ D R+L+++++ Q+ K+ E P T + + + IA + Q
Sbjct: 61 LEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPT-KILVQEIASVMQ 119
Query: 397 KYTQSNGRRPFGISCLIGGFDYDGSPHLFQTEPS 498
+ TQS G RPFG+S L+ G D G P L+Q +PS
Sbjct: 120 ESTQSGGVRPFGVSLLVAGMDEKG-PSLYQVDPS 152
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 97.1 bits (231), Expect = 1e-21
Identities = 53/149 (35%), Positives = 79/149 (53%)
Frame = +1
Query: 52 RYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 231
+YD T +SP G L QVEYA EA+++GS K++ +L + +K
Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ--KK 62
Query: 232 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 411
+ +DDH+ +A AGL DAR+L N + E S K P+ + + +A Q TQ
Sbjct: 63 LIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQE 122
Query: 412 NGRRPFGISCLIGGFDYDGSPHLFQTEPS 498
GRRP+G+ L+ G+D G PHL + +PS
Sbjct: 123 YGRRPYGVGFLVIGYDESG-PHLLEFQPS 150
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 78.2 bits (184), Expect = 6e-16
Identities = 46/148 (31%), Positives = 69/148 (46%)
Frame = +1
Query: 55 YDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRKI 234
YD + FSPDG L Q EYA +AV ST EK +KL + R +I
Sbjct: 8 YDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRI 66
Query: 235 CLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSN 414
+D H+ +A G D + ++ RA+ E S + P+ I + Q +T +
Sbjct: 67 GSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYS 126
Query: 415 GRRPFGISCLIGGFDYDGSPHLFQTEPS 498
RPFG+ + +D +G PHL+ EP+
Sbjct: 127 SVRPFGVMSFVATYDSEG-PHLYMVEPN 153
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 75.4 bits (177), Expect = 5e-15
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = +1
Query: 55 YDRAITVFSPDGHLLQVEYAQEAVRK-GSTAXXXXXXXXXXXXXEKKSVAKLQEERTVRK 231
+DR ITVFSP+G L QVEYA +A G T+ +KK KL + TV+
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 232 ICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQS 411
+ + + G ADAR ++RA+ E + P+ + + + +A + Q TQ
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQR 126
Query: 412 NGRRPFGISCLIGGFDYDGSPHLFQTEPS 498
RP G++ + D + P LF+ +P+
Sbjct: 127 AAMRPLGVAMTLVAVDDEIGPSLFKLDPA 155
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.7 bits (66), Expect = 0.13
Identities = 14/72 (19%), Positives = 37/72 (51%)
Frame = +1
Query: 187 KKSVAKLQEERTVRKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEY 366
+ S L +TV+K+ ++ +++ AG AD + +EC+ H+L ++ +++
Sbjct: 80 RASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSA 139
Query: 367 ITRYIAGLKQKY 402
++ ++ + Y
Sbjct: 140 ASKILSNITYSY 151
>SPAC30C2.05 |erv14||cornichon family protein
Erv14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 141
Score = 27.1 bits (57), Expect = 1.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 487 FGRDEVIHHSRILQSNKIFQKVGGH 413
F ++VIH + IL + +IF+++G H
Sbjct: 87 FHANQVIHKTHILDATEIFRQLGRH 111
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 6.4
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = -1
Query: 467 PS*SNPPIKQDIPKGRRPLLWVYFCFSPAI--------YLVIYS-NVTGSSTVNL*DWHS 315
P+ P +DIP R +L + C P + YL S N T S + L HS
Sbjct: 375 PNFPEPKFFEDIPNTERCILSAFICSPPQLPLPNPLRMYLPCPSLNSTEVSVITLAPQHS 434
Query: 314 I*ALLIKIR-ASAVKPAKAITTWSSRR 237
++I + A A+K IT + +R
Sbjct: 435 FLNIVINLNPALALKSYTIITLLNGKR 461
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,829
Number of Sequences: 5004
Number of extensions: 29021
Number of successful extensions: 92
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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