Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L07
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...   117   3e-28
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   4.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.8  

>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score =  117 bits (281), Expect = 3e-28
 Identities = 57/151 (37%), Positives = 91/151 (60%)
 Frame = +1

Query: 46  SARYDRAITVFSPDGHLLQVEYAQEAVRKGSTAXXXXXXXXXXXXXEKKSVAKLQEERTV 225
           S RY  ++T FSP G L+Q+EYA  AV  G+ +             E K  + L +E +V
Sbjct: 3   SERYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKAVNGVVIATENKQKSILYDEHSV 62

Query: 226 RKICLLDDHVVMAFAGLTADARILINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYT 405
            K+ ++ +H+ M ++G+  D R+L+ +A+   Q++ LT  +P+    + + +A + Q+YT
Sbjct: 63  HKVEMVTNHIGMIYSGMGPDYRLLVKQARKLAQNYYLTYREPIPTSQLVQKVATVMQEYT 122

Query: 406 QSNGRRPFGISCLIGGFDYDGSPHLFQTEPS 498
           QS G RPFG+S LI G+D DG P+LFQ +PS
Sbjct: 123 QSGGVRPFGVSLLICGWD-DGRPYLFQCDPS 152


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 295  LINRAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRP 426
            L+ R    C   + TV     +  +  +I   K  YT+ +GRRP
Sbjct: 1509 LMKRYLYNCNGKRTTVFSEQGM--VEEFITESKAVYTRESGRRP 1550


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 420 PTFWNILFDWRIRL 461
           PT WN+++D  +RL
Sbjct: 629 PTLWNVMYDDLLRL 642


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 420 PTFWNILFDWRIRL 461
           PT WNI++D  +R+
Sbjct: 640 PTLWNIMYDGVLRV 653


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 420 PTFWNILFDWRIRL 461
           PT WN+++D  +R+
Sbjct: 653 PTLWNVMYDGVLRI 666


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,769
Number of Sequences: 2352
Number of extensions: 6641
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)