Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L06
         (367 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.24 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.24 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.24 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   3.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   9.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   9.1  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +2

Query: 65  TFNLFTILCRNGSWLNSRIDASSTFSPTSEVVMLSRTSTIPLQRRS 202
           TF+     CR+ ++ N+R + +  F P +  +++   +  P   RS
Sbjct: 381 TFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSPESNRS 426


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 254  FRKKCAVYMYMRVSLKPNQM 313
            FRKK   Y+  R+S+ PN++
Sbjct: 1414 FRKKSLAYVQQRMSIAPNRV 1433


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 254  FRKKCAVYMYMRVSLKPNQM 313
            FRKK   Y+  R+S+ PN++
Sbjct: 1414 FRKKSLAYVQQRMSIAPNRV 1433


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +2

Query: 65  TFNLFTILCRNGSWLN-SRIDASST-FSP 145
           T  L +++C+ G W+  + +    T FSP
Sbjct: 2   TIQLLSLICKFGGWMGLTPVSVEPTGFSP 30


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 211 FVITPSLQRNR*SSTQHNYLAG 146
           F ITP  ++NR +  +  Y  G
Sbjct: 16  FAITPGFRKNRTTCPEKIYAYG 37


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 211 FVITPSLQRNR*SSTQHNYLAG 146
           F ITP  ++NR +  +  Y  G
Sbjct: 16  FAITPGFRKNRTTCPEKIYAYG 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,542
Number of Sequences: 336
Number of extensions: 1502
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)