Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L04
         (244 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   6.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   6.7  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    19   8.8  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -2

Query: 237 WASQPNCDGV 208
           WA   NC G+
Sbjct: 113 WAKNQNCSGI 122


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -2

Query: 237 WASQPNCDGV 208
           WA   NC G+
Sbjct: 110 WAKNENCSGI 119


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 141 GRSGDTGTTGMGLQPKM 191
           G  GD G  G   QP++
Sbjct: 112 GIVGDAGVRGTAQQPRL 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,991
Number of Sequences: 438
Number of extensions: 771
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)