Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L02
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 71 6e-13
11_01_0750 - 6315126-6315896,6316371-6316784 64 6e-11
05_06_0044 - 25150322-25151260 62 3e-10
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 58 4e-09
11_02_0012 - 7346282-7347136,7347234-7347593 48 3e-06
01_01_1152 + 9170628-9171899 48 4e-06
11_01_0767 + 6438648-6438809,6439146-6440000 46 1e-05
11_02_0011 - 7337618-7338496,7338596-7338991 46 2e-05
11_01_0771 + 6453130-6454488 37 0.011
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 33 0.10
11_02_0014 - 7352619-7352918,7353173-7353418 31 0.55
11_03_0128 - 10437407-10438049,10438097-10438272 29 2.9
03_05_0034 + 20064750-20065001,20065542-20065730,20066313-200665... 29 2.9
03_02_0069 + 5401789-5401965,5403514-5403568,5403674-5405649,540... 28 5.1
08_02_0600 - 19166283-19166851,19166988-19168839,19169347-191694... 27 6.8
01_06_0145 + 26964898-26965169,26965319-26965400,26966131-269663... 27 6.8
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 70.9 bits (166), Expect = 6e-13
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Frame = +3
Query: 15 TRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMH 194
T G IK+ +I N + L N ++F+G W F +T + +FH+ +V+ P M
Sbjct: 477 TSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMS 536
Query: 195 LQEQLPYTENKELGARLIELPYSEDG----FRMVVVLPDKLDGLKSVLQKA-AERGLLED 359
+++ Y + + ++++LPY + G F M ++LP+ DGL S+ +K +E +E+
Sbjct: 537 TRKK-QYLSSYD-SLKVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFMEN 594
Query: 360 VFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIF 476
++P +LPKF++ G + LL +G+ +F
Sbjct: 595 HIPMRPVHVG-QFKLPKFKISFGFGASGLLKGLGLPLLF 632
Score = 67.7 bits (158), Expect = 5e-12
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Frame = +3
Query: 15 TRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMH 194
T G IK + ++ + L N ++F+G W F A +T + +FH+ +V+ P M
Sbjct: 225 TSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFMS 284
Query: 195 LQEQLPYTENKELGARLIELPYSEDG----FRMVVVLPDKLDGLKSVLQKA-AERGLLED 359
++ L ++++LPY + G F M ++LP+ DGL S+ +K +E LE
Sbjct: 285 TSKKQYILSYDNL--KVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFLEK 342
Query: 360 VFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIF-DEAARGLVVDS 509
+ + +LPKF++ G + ++LL +G+ F EA +VDS
Sbjct: 343 HIPTRQVTVG-QFKLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDS 392
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 64.1 bits (149), Expect = 6e-11
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Frame = +3
Query: 9 EKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPT 188
+ T+G + + + TI N + L + ++F+G WL R T E+ F+ T+V+ P
Sbjct: 152 DSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPF 211
Query: 189 MHLQEQLPYTENKELGARLIELPY----SEDGFRMVVVLPDKLDGLKSVLQKA-AERGLL 353
+ + + ++I+LPY +E F M + LPD DGL + QK +E L
Sbjct: 212 VEYDRTRLFAVHDNF--KVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFL 269
Query: 354 EDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIF 476
E L V + +P F++ +D+ + L ++G+ F
Sbjct: 270 EQ--HLPTEKCHVGISVPNFKISFQIDVKDFLKDMGLELPF 308
>05_06_0044 - 25150322-25151260
Length = 312
Score = 61.7 bits (143), Expect = 3e-10
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Frame = +3
Query: 57 APNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMHLQEQLPYTE-NKEL 233
A +A+V L N ++F +W PF T E DFHV V+ P M Q + +
Sbjct: 73 AISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHP 132
Query: 234 GARLIELPYSEDG-------FRMVVVLPDKLDGLKSVLQKAAERG---LLEDVFRLQPTS 383
G ++ + Y G F M + LPD DGL + +K A L + QP
Sbjct: 133 GFNVLRMMYRTGGAAGGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPV- 191
Query: 384 AAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAA 488
A L++PKFEV ++ + LL E G+ F AA
Sbjct: 192 AVGELKIPKFEVSLKVEASRLLREFGLDLPFLPAA 226
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 58.0 bits (134), Expect = 4e-09
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Frame = +3
Query: 15 TRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMH 194
T G IK + ++ + L N ++F+G W F A +T + +F + +V P M
Sbjct: 17 TSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMS 76
Query: 195 LQEQLPYTENKELGARLIELPYSEDG----FRMVVVLPDKLDGLKSVLQKA-AERGLLED 359
++ + L ++++LPY + F M ++LP+ DGL S+ K +E LE
Sbjct: 77 TSKKQYLSSYDSL--KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEK 134
Query: 360 VFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAA 488
+ + +LPKF++ G + ++LL +G+ F A
Sbjct: 135 RIPTRQVTVG-KFKLPKFKISFGFEASDLLKILGLQLPFSSKA 176
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 48.4 bits (110), Expect = 3e-06
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 27/185 (14%)
Frame = +3
Query: 6 NEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKP 185
++ T I+ + + ++ A+ L N I+F+G W PF T FH ++V P
Sbjct: 133 SKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAP 192
Query: 186 TMHLQE-------------QLPY---TENKELGARL---IELPYSED-GFRMVVVLPDKL 305
M +E +LPY +N G + I Y E+ G M + LPD
Sbjct: 193 FMSSREDQYIGFYDGFKVLKLPYHRTMKNHGDGGDITPAILKHYGENVGLSMYIFLPDAR 252
Query: 306 DGLKSVLQK--AAERGLLEDVFRL--QPTSAAV---NLELPKFEVKSGLDLNNLLPEIGV 464
DGL +++ K A G F +P + +L +P+F+V ++N +L +G+
Sbjct: 253 DGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFKVSFYSEMNEVLKGMGI 312
Query: 465 SKIFD 479
FD
Sbjct: 313 GAAFD 317
>01_01_1152 + 9170628-9171899
Length = 423
Score = 48.0 bits (109), Expect = 4e-06
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Frame = +3
Query: 6 NEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKP 185
++ T G I+ + N++ + V L N + F+G W +PF T FH+ V+ P
Sbjct: 168 SDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAP 227
Query: 186 TMHLQEQLPYTENKEL--GARLIELPYSEDG------------FRMVVVLPDKLDGLKSV 323
M ++P+ + G ++LPY G F M+++LPD LK
Sbjct: 228 FM--TTEIPFERHVAAFPGFTALKLPYKNVGGGGGGDGVPRAAFYMLLLLPDGDGALK-- 283
Query: 324 LQKAAERGLLEDVFRLQPTSAAV----NLELPKFEVKSGLDLNNLLPEIGVSKIF 476
L + + F + T AA L +PKF+ + + + ++GV++ F
Sbjct: 284 LADLYDMAVTTPEFIKKHTPAAEAPVRRLMVPKFKFSFKFEAKSDMRKLGVTRAF 338
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.4 bits (105), Expect = 1e-05
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 14/126 (11%)
Frame = +3
Query: 84 NVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMHLQEQLPYTENKELGARLIELP-- 257
N I+F+G WL PF +T E++F ++V+ P M + G R++ LP
Sbjct: 93 NAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYK 152
Query: 258 -----------YSEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSAAV-NLE 401
YS F M+V LPD DGL +L + D L P V
Sbjct: 153 ATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDE-HLPPGCVPVGRFR 211
Query: 402 LPKFEV 419
+PKF++
Sbjct: 212 VPKFKL 217
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 46.0 bits (104), Expect = 2e-05
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 31/189 (16%)
Frame = +3
Query: 6 NEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKP 185
++ T I + + ++ + A+ L N I+F+G W PF T FH ++V P
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVP 204
Query: 186 TMHLQE-------------QLPYTE--------------NKELGARLIELPYSED-GFRM 281
M +E +LPY N + ++E E+ G M
Sbjct: 205 FMSSREDQYIGFHDGFTVLKLPYHHRTMKNHGDGGDTITNSSITRAILEHYGGENVGLSM 264
Query: 282 VVVLPDKLDGLKSVLQKAAERGLLEDVFR-LQPT--SAAVNLELPKFEVKSGLDLNNLLP 452
+ LPD+ DGL +++ K A R +PT +L +P+F+V +N +L
Sbjct: 265 YIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFKVSFYSQINGVLQ 324
Query: 453 EIGVSKIFD 479
+GV+ FD
Sbjct: 325 GMGVTAAFD 333
>11_01_0771 + 6453130-6454488
Length = 452
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 3 ANEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFH 155
A T I + ++ P AV L N I+F+G W PF +T K F+
Sbjct: 181 ARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
Score = 33.9 bits (74), Expect = 0.078
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 273 FRMVVVLPDKLDGLKSVLQKAAER-GLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLL 449
+ M + LPD DGL+ ++++ A R G L + +PKF+V G + L
Sbjct: 294 YAMAIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFKVSCGGSVVGAL 353
Query: 450 PEIGV 464
++G+
Sbjct: 354 EQLGL 358
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 33.5 bits (73), Expect = 0.10
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 261 SEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSAAVN-LELPKFEVKSGLDL 437
+ DG ++P LD ++S+ KAA++G D T + L+L + GLDL
Sbjct: 532 NSDGRLTKAIIPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMNSLLQLRDIALSGGLDL 591
Query: 438 NNLLP 452
N +P
Sbjct: 592 NRPVP 596
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 31.1 bits (67), Expect = 0.55
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = +3
Query: 6 NEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKP 185
++ T I + + ++ + L N I+F+G W PF T FH ++V
Sbjct: 95 SKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVR 154
Query: 186 TMHLQEQLPYTENKELGARLIELPYS 263
M +E Y + G +++LPY+
Sbjct: 155 FMRSRED-QYIGFYD-GFNVLKLPYN 178
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 273 FRMVVVLPDKLDGLKSVLQKAAER 344
+ MV+ LPD DGL+ +++K A R
Sbjct: 193 YAMVIFLPDVRDGLRGLVEKMASR 216
>03_05_0034 +
20064750-20065001,20065542-20065730,20066313-20066511,
20069479-20069885
Length = 348
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 282 VVVLPDKLDGLKSVLQKAAERGL-LEDVFRLQPTSAAVNLELP 407
V LPD DG++ ++ + A +GL L+D+ L A N P
Sbjct: 182 VTYLPDSFDGIRRLITRFASKGLSLKDLAVLSGAHALGNTHCP 224
>03_02_0069 +
5401789-5401965,5403514-5403568,5403674-5405649,
5405710-5405868,5406081-5406252,5406617-5406915,
5407147-5407392
Length = 1027
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 378 TSAAVNLELPKFEVKSGLDLNNLLPEIGV 464
T + +E P F KS +LN L+P+I V
Sbjct: 701 TEGGIAIEGPDFRTKSAEELNELIPKIQV 729
>08_02_0600 -
19166283-19166851,19166988-19168839,19169347-19169415,
19171797-19171844,19173500-19173622
Length = 886
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 210 PYTENKELGARLIELPYSEDGFRMVVVLP 296
P+T KEL +L S D FR+ VVLP
Sbjct: 575 PHTIPKELSLKLASKIRSGDSFRVYVVLP 603
>01_06_0145 +
26964898-26965169,26965319-26965400,26966131-26966345,
26966912-26966975,26967336-26967440
Length = 245
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -3
Query: 475 NIFETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPL 341
+I ET SG+ ++ +P + NL S L A L+G +L +SS RP+
Sbjct: 155 SILETQYSGDTVVIVSP-DSDNL--SILQAGLIGLDLRSSSYRPM 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,824,551
Number of Sequences: 37544
Number of extensions: 285920
Number of successful extensions: 883
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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