Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L02
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 88 5e-18
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 86 1e-17
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 81 4e-16
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_40572| Best HMM Match : Ank (HMM E-Value=0.0017) 31 0.43
SB_37805| Best HMM Match : DoxA (HMM E-Value=1.7) 31 0.74
SB_9028| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_52960| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 28 4.0
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 28 4.0
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_51027| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 27 9.2
SB_27979| Best HMM Match : Fucose_iso_C (HMM E-Value=2.3) 27 9.2
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 87.8 bits (208), Expect = 5e-18
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = +3
Query: 9 EKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPT 188
E+T+ I IA + L N I+F+G W PFK + +F S V+
Sbjct: 102 ERTKKKICDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEM 161
Query: 189 MHLQEQLPYTENKELGARLIELPYSEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFR 368
M + + Y + + +L+ELPY + MV+VLPD+ +GL + ++ + D+F
Sbjct: 162 MFQKSKFKYLHSDKYKCKLLELPYVDTQLSMVLVLPDETEGL-ARFEQDLTHDKMTDIFN 220
Query: 369 LQPTS--AAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAA 488
+ A V + +PKF++ S LN L E+G+ K+FD+AA
Sbjct: 221 SVSSQRPADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAA 262
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 86.2 bits (204), Expect = 1e-17
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Frame = +3
Query: 6 NEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHV----DSKTT 173
+++T+G+IK I I + + N ++F+G W F T F V +SK
Sbjct: 106 HQQTKGNIKELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIE 165
Query: 174 VKKPTMHLQEQLPYTENKELGARLIELPYSEDGFRMVVVLPDKLDGLKSVLQKAAERGLL 353
V+ T ++ Y + ++ R++ELPYS D MV++LP++ G+ S L+K+ + ++
Sbjct: 166 VEMMTRKMKVNFYY--DADIKCRVVELPYSGDDTAMVIILPEEPSGIFS-LEKSIDVEIM 222
Query: 354 EDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIFD---------EAARGLVVD 506
E RL + V + +PKF + L+L +LL ++GVS IFD AA+GL V
Sbjct: 223 EKWRRLM-INTTVEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKGLYVS 281
Query: 507 SSL 515
S++
Sbjct: 282 SAI 284
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 81.4 bits (192), Expect = 4e-16
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Frame = +3
Query: 9 EKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPT 188
+KT+ IK+ I E + + L N ++F+G W+ F T F ++
Sbjct: 139 QKTKDKIKNLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQF 198
Query: 189 MHLQEQLPYTENKELGARLIELPYSEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFR 368
M+ + Y E+ LG +++ELPY+ + MVV+LP+++DGL + + L E +
Sbjct: 199 MYQSSEFRYLESSTLGCQIVELPYAGEKLSMVVLLPNEVDGLGKLESSLNKETLQEAMTS 258
Query: 369 LQPT-SAAVNLELPKFEVKSGLDLNNLLPEIGVSKIF 476
L+ + V + LPKF + L L +G S +F
Sbjct: 259 LRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDLF 295
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 33.9 bits (74), Expect = 0.080
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = -3
Query: 505 STTSPRAASSNIFETP---ISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPLSA 335
ST++PR S+ P + N R+ T GS+ T+A T S SA
Sbjct: 38 STSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSA 97
Query: 334 AFCNTDFKPSSLSGRTTTIRKPS-SEYGNSINRAPSS 227
+T +G TTT PS S NS RAPS+
Sbjct: 98 PSTSTP-----RTGSTTTTSAPSTSTTSNSTTRAPST 129
>SB_40572| Best HMM Match : Ank (HMM E-Value=0.0017)
Length = 205
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = -3
Query: 202 SCRCIVGFFTVVLESTWKSFSTVSLA--LNGMSQWPWKNITLKRATAALGAIVFSAIGDL 29
S RC+ G T++ S+ + S VS A L + +W W NI + +A+LG FS + ++
Sbjct: 61 SPRCVGG--TLLFTSSCGAISPVSPACGLPDIFEWKWFNIESPKLSASLGTDEFSMLSNV 118
Query: 28 I 26
+
Sbjct: 119 L 119
>SB_37805| Best HMM Match : DoxA (HMM E-Value=1.7)
Length = 788
Score = 30.7 bits (66), Expect = 0.74
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 108 WLM-PFKARETVEKDF-HVDSKTTVKKPTMHLQEQLPYTENKELGARLIELPYSEDGFRM 281
WL P ++ EK+ HVDS ++P ++L+ P + L A+L + + + +
Sbjct: 36 WLRSPERSERVYEKELEHVDSLLG-EEPGVYLEGDHPTINDYRLLAKLYQTGTAAEKLKG 94
Query: 282 VVVLPDKLDGLKSVLQKAAERGLLED 359
V+ PD+L LK + + + G +D
Sbjct: 95 YVI-PDRLARLKKFMAEGQQLGTFKD 119
>SB_9028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -3
Query: 409 LGSSKLTAALVGCNLNTSSRRPLSAAFCNTDFKPSSLSGRTTTIRKPSSEYGN 251
L S K+ A+ + RPLS T KPS++ +T IR+ + + GN
Sbjct: 46 LPSVKIRQAIDHYRVTFGEHRPLSCYIWQTFAKPSNIVLHSTNIRQDNDDLGN 98
>SB_52960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 6 NEKTRGHIKSPI--AENTIAPNAAVALFNVIFF 98
NE+ ++K + NTI+P AVA+F ++F+
Sbjct: 432 NERLHKYLKRSLLGGANTISPELAVAIFTMVFY 464
>SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
Length = 356
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = -3
Query: 502 TTSPRAASSNIFETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPLSAAFCN 323
TTS S + F T N N S+ T A T++ RP S +
Sbjct: 54 TTSDIPNSQSTFTTSERPNSQSTFTTTARPNSQSTFTTTARPFQPTFTTTARPKSQSTST 113
Query: 322 TDFKPSSLSGRTTTIRKPSSEY 257
T +P+SLS TTT R S +
Sbjct: 114 TTARPNSLSTFTTTARPLQSTF 135
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 466 ETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSR 350
+TP+ + L+ NP+ N +KL ++G NL + S+
Sbjct: 980 KTPVPRSAALKDNPVAAQNTEEAKLREGIIGENLLSVSK 1018
>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 27.5 bits (58), Expect = 6.9
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +3
Query: 219 ENKELGARLIELPYSEDGFRMVVVLPDKLDGLKSVLQKAAERGLLEDVFRLQPTSAAVNL 398
E +EL +L L +D + +V + L K L K E GL E +Q SA
Sbjct: 216 EIEELREKLSRLEEEKDFLQKMV---ETLAIAKENLTKEVE-GLKESNQLMQKDSADAKS 271
Query: 399 ELPKFEVK------SGLDLNNLLPEIGVSKIFDEAARG 494
+L E K S LDL N L E+ + D+ +RG
Sbjct: 272 QLNDIEEKLAESRESNLDLLNQLDELKMQASLDQTSRG 309
>SB_51027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 208 YLTLKIKSSEHG*SNCRIRRMVSVWW 285
Y+ +I G + CR R +SVWW
Sbjct: 169 YVLDRIHDGHQGVTKCRERERLSVWW 194
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 27.1 bits (57), Expect = 9.2
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = -3
Query: 493 PRAASSNIFETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPLSAAFCNTDF 314
P ++ IF +P+S + P+ +S+ + A + N LSA +T F
Sbjct: 324 PSSSQGGIFGSPLSASNSF--GPMISSS------STAPISSNPPEDKYSALSAL--DTLF 373
Query: 313 KPSSLSGRTTTIRKPSSEYGNSI 245
PSS +G T + PSS G S+
Sbjct: 374 GPSSNAGGTVSSSMPSSTGGGSV 396
>SB_27979| Best HMM Match : Fucose_iso_C (HMM E-Value=2.3)
Length = 558
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 122 EWH-EPMALEEYNIEKSNRCVRSYSIFSDWRFNMSSG 15
+W+ E MA++ +I+K V+ YS+ +RF S G
Sbjct: 334 DWYRELMAVDGVDIDKMRHRVKDYSLSGAYRFGPSVG 370
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,986,948
Number of Sequences: 59808
Number of extensions: 325607
Number of successful extensions: 1054
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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