Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L02
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   2.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   7.5  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 337 AAFCNTDFKPSSLSGRTTTIRKPSSEYGNS 248
           A F NT+  P +   R     KP +E GN+
Sbjct: 16  AVFGNTNLDPPTRPARLRREAKPEAEPGNN 45


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 154 WKSFSTVSLALNGMSQWPW 98
           W+S+    +A N ++ W W
Sbjct: 56  WRSYVVCDVAYNNVNNWLW 74


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 337 AAFCNTDFKPSSLSGRTTTIRKPSSEYGNS 248
           A F NT+  P +   R     KP +E GN+
Sbjct: 15  AVFGNTNLDPPTRPTRLRREAKPEAEPGNN 44


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
 Frame = -3

Query: 370  NLNTSSRRPLSAAFCNTDFKP-------SSLSGRTTTIRKPSSEYGNSI 245
            N + S R  LS A C+ D          SSL  R +T   PSS+Y  ++
Sbjct: 1875 NGDRSDRPELSEAECDIDSLKKLKLGLRSSLWSRPSTQNNPSSDYSIAV 1923


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
 Frame = -3

Query: 370  NLNTSSRRPLSAAFCNTDFKP-------SSLSGRTTTIRKPSSEYGNSI 245
            N + S R  LS A C+ D          SSL  R +T   PSS+Y  ++
Sbjct: 1871 NGDRSDRPELSEAECDIDSLKKLKLGLRSSLWSRPSTQNNPSSDYSIAV 1919


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 337 AAFCNTDFKPSSLSGRTTTIRKPSSEYGNS 248
           A F NT+  P +   R     +P +E GN+
Sbjct: 16  AVFGNTNLDPPTRPTRLRREAEPEAEPGNN 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,813
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)