Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_L02
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 68 3e-12
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 68 4e-12
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 66 1e-11
At2g35580.1 68415.m04357 serpin family protein / serine protease... 63 9e-11
At1g64030.1 68414.m07252 serpin family protein / serine protease... 60 9e-10
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 56 2e-08
At2g14540.1 68415.m01628 serpin family protein / serine protease... 45 3e-05
At1g64010.1 68414.m07250 serpin, putative / serine protease inhi... 42 3e-04
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 32 0.26
At4g39840.1 68417.m05645 expressed protein 31 0.46
At1g66530.1 68414.m07559 arginyl-tRNA synthetase, putative / arg... 31 0.61
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 30 1.1
At1g55050.1 68414.m06288 expressed protein ; expression supporte... 30 1.1
At4g26300.1 68417.m03783 arginyl-tRNA synthetase, putative / arg... 29 2.5
At3g17640.1 68416.m02253 leucine-rich repeat family protein cont... 28 3.2
At4g00510.1 68417.m00070 cyclic nucleotide-binding domain-contai... 28 4.3
At1g19140.2 68414.m02381 expressed protein 27 7.5
At1g19140.1 68414.m02380 expressed protein 27 7.5
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 27 7.5
At4g16563.1 68417.m02506 aspartyl protease family protein contai... 27 9.9
At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (AB... 27 9.9
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 68.1 bits (159), Expect = 3e-12
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 7/176 (3%)
Frame = +3
Query: 3 ANEKTRGHIKSPIAENTIAP--NAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTV 176
A T G IK ++ ++I ++ + L N ++F+G W F A T + DFH+ T+V
Sbjct: 77 AEVHTNGLIKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSV 136
Query: 177 KKPTMHLQEQLPYTENKELGARLIELPYSED--GFRMVVVLPDKLDGLKSVLQK-AAERG 347
K P M E Y + + G +++ LPY ED F M + LP+ +GL +L+K +E
Sbjct: 137 KVPFMTNYED-QYLRSYD-GFKVLRLPYIEDQRQFSMYIYLPNDKEGLAPLLEKIGSEPS 194
Query: 348 LLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAARGL--VVDS 509
++ L S +PKF+ + + +L ++G++ F+ GL +VDS
Sbjct: 195 FFDNHIPLHCISVGA-FRIPKFKFSFEFNASEVLKDMGLTSPFNNGG-GLTEMVDS 248
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 67.7 bits (158), Expect = 4e-12
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Frame = +3
Query: 3 ANEKTRGHIKSPIAENTIAP--NAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTV 176
A T G IK +++++I + + L N ++F+G W F A+ T DFH+ T V
Sbjct: 142 AEVHTNGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMV 201
Query: 177 KKP--TMHLQEQLPYTENKELGARLIELPYSED--GFRMVVVLPDKLDGLKSVLQKAAER 344
K P T + ++ L Y + G +++ LPY ED F M + LP+ DGL ++L++ + +
Sbjct: 202 KVPFMTNYKKQYLEYYD----GFKVLRLPYVEDQRQFAMYIYLPNDRDGLPTLLEEISSK 257
Query: 345 GLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIFDEAARGLVVDS 509
D + ++PKF+ +++L E+G++ F + +V+S
Sbjct: 258 PRFLDNHIPRQRILTEAFKIPKFKFSFEFKASDVLKEMGLTLPFTHGSLTEMVES 312
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 66.1 bits (154), Expect = 1e-11
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 63 NAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMHLQEQLPYTENKELGAR 242
N+ + L N ++F+ W F A+ T + DFH+ TVK P M + + Y + G +
Sbjct: 164 NSTLILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFM-MSYKDQYLRGYD-GFQ 221
Query: 243 LIELPYSED--GFRMVVVLPDKLDGLKSVLQK-AAERGLLEDVFRLQPTSAAVNLELPKF 413
++ LPY ED F M + LP+ DGL ++L+K + E G L+ L T L +PK
Sbjct: 222 VLRLPYVEDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDA-LRIPKL 280
Query: 414 EVKSGLDLNNLLPEIGVSKIF 476
+ +L ++G++ F
Sbjct: 281 NFSFEFKASEVLKDMGLTSPF 301
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 63.3 bits (147), Expect = 9e-11
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Frame = +3
Query: 9 EKTRGHIKSPIAENT-IAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKP 185
++T G I + + N AP N +FF G W F T + DFH+ T V+ P
Sbjct: 144 KQTNGLITNLLPSNPKSAPLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVP 203
Query: 186 TMHLQEQLPYTENKELGARLIELPY---SED--GFRMVVVLPDKLDGLKSVLQK-AAERG 347
M YT E G ++I L Y ED F M + LPD+ DGL S+L++ A+ RG
Sbjct: 204 FM-TGASCRYTHVYE-GFKVINLQYRRGREDSRSFSMQIYLPDEKDGLPSMLERLASTRG 261
Query: 348 LLEDVFRLQPTSAAV-NLELPKFEVKSGLDLNNLLPEIGV 464
L+D L SA + L++P+F+ + + L G+
Sbjct: 262 FLKDNEVLPSHSAVIKELKIPRFKFDFAFEASEALKGFGL 301
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 60.1 bits (139), Expect = 9e-10
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Frame = +3
Query: 15 TRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMH 194
T IK + + ++ N + F+G W PF+ T + DF++ + T+V P M
Sbjct: 147 TNNLIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFMS 206
Query: 195 LQEQLPYTENKELGARLIELPY---SED---GFRMVVVLPDKLDGLKSVLQKAAERGLLE 356
E Y + G +++ LPY S+D F M LPDK DGL +L+K A
Sbjct: 207 SYEN-QYVRAYD-GFKVLRLPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFL 264
Query: 357 DVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGV 464
D +PKF+++ G + ++L +G+
Sbjct: 265 DSHIPTYRDELEKFRIPKFKIEFGFSVTSVLDRLGL 300
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 55.6 bits (128), Expect = 2e-08
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Frame = +3
Query: 3 ANEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKK 182
A ++T G I + E + + N ++F+G W F T E +FH+ V
Sbjct: 142 AEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTA 201
Query: 183 PTMHLQEQLPYTENKELGARLIELPY----SEDGFRMVVVLPDKLDGLKSVLQK-AAERG 347
P M ++ Y + G +++ LPY + F M LPD +GL +L K + G
Sbjct: 202 PFM-TSKKKQYVSAYD-GFKVLGLPYLQGQDKRQFSMYFYLPDANNGLSDLLDKIVSTPG 259
Query: 348 LLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKIF 476
L++ + ++PKF+ G D +N+L +G++ F
Sbjct: 260 FLDNHIPRRQVKVR-EFKIPKFKFSFGFDASNVLKGLGLTSPF 301
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 44.8 bits (101), Expect = 3e-05
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Frame = +3
Query: 3 ANEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKK 182
A+ T IK + ++ N ++F+G W F T +K FH+ + +V
Sbjct: 171 ASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSV 230
Query: 183 PTMHLQEQLPYTENKELGARLIELPYSED------GFRMVVVLPDKLDGLKSVLQKAAER 344
P M E+ + E + G +++ LPY + F M + LPDK L ++L++
Sbjct: 231 PFMRSYEK-QFIEAYD-GFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLLERITSN 288
Query: 345 GLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNL 446
D + + +PKF+++ G + +++
Sbjct: 289 PGFLDSHIPEYRVDVGDFRIPKFKIEFGFEASSV 322
>At1g64010.1 68414.m07250 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 185
Score = 41.5 bits (93), Expect = 3e-04
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Frame = +3
Query: 135 TVEKDFHVDSKTTVKKPTMHLQEQLPYTENKELGARLIELPYSEDG-----FRMVVVLPD 299
T ++DFH+ + T+V M + Y E + G ++++LP+ + F M LPD
Sbjct: 2 TKDRDFHLINGTSVSVSLMSSYKD-QYIEAYD-GFKVLKLPFRQGNDTSRNFSMHFYLPD 59
Query: 300 KLDGLKSVLQK-AAERGLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLLPEIGVSKI 473
+ DGL ++++K A+ G L+ Q +PKF+++ G + +G+ ++
Sbjct: 60 EKDGLDNLVEKMASSVGFLDSHIPSQKVKVG-EFGIPKFKIEFGFSASRAFNRLGLDEM 117
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 15 TRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKKPTMH 194
T G IK+ + ++ N ++F+G W F T+ K FH+ + V P M
Sbjct: 47 TNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFMK 106
Query: 195 LQEQ 206
E+
Sbjct: 107 SYER 110
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 31.1 bits (67), Expect = 0.46
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = -3
Query: 514 KELSTTSPRAASSNIFETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPLSA 335
K +S++S + + +T G ++ +SN ++K ++ L N T S S+
Sbjct: 99 KPISSSSSTKNQTKLAKTTTMGTSHKLNSTKSSSN--TTKTSSELKKLNSGTKSTNSTSS 156
Query: 334 AFCNTDFKPSSLSGRTTTIRKPSSE 260
+ D SS S TTI+ PSS+
Sbjct: 157 IKKSADLSKSSSSKNKTTIKPPSSK 181
>At1g66530.1 68414.m07559 arginyl-tRNA synthetase, putative /
arginine--tRNA ligase, putative similar to SP|P37880
Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA
ligase) (ArgRS) {Cricetulus longicaudatus}; contains
Pfam profiles PF00750: arginyl-tRNA synthetase, PF03485:
arginyl-tRNA synthetase N-terminal domain
Length = 590
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -3
Query: 307 SSLSGRTTTIRKPSSEYGNSINRAPSSLFSV*GNCSCRCIVGFFTVVLESTWKSFSTVSL 128
S + G+ T R P + I P+S + +CS GF VVL S W + S ++
Sbjct: 58 SLIKGKGTQFRGPPAVGQALIQSLPTS--EMVESCSIAG-PGFVNVVLSSKWMAKSIENM 114
Query: 127 ALNGMSQWPWKNITLKRA 74
++G+ W +++KRA
Sbjct: 115 LVDGIDTWA-PTLSVKRA 131
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/88 (23%), Positives = 37/88 (42%)
Frame = +3
Query: 3 ANEKTRGHIKSPIAENTIAPNAAVALFNVIFFQGHWLMPFKARETVEKDFHVDSKTTVKK 182
A++ T G I + ++ N ++F+G W F T + +FH + V
Sbjct: 20 ASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKEVHV-- 77
Query: 183 PTMHLQEQLPYTENKELGARLIELPYSE 266
P M E Y + G +++ LPY +
Sbjct: 78 PFMRSYES-QYIMACD-GFKVLGLPYQQ 103
>At1g55050.1 68414.m06288 expressed protein ; expression supported
by MPSS
Length = 914
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 152 EILLYSFSSFEWHEPMAL-EEYNIEKSNRCVRSYSIFSDWRFNMSSGLLV 6
EILL+ + F Y ++S RC++ ++SDWR + L+
Sbjct: 161 EILLFYYGKFYGSAKYKTWSNYLKKRSTRCIQGKKLYSDWRLQLLLSRLI 210
>At4g26300.1 68417.m03783 arginyl-tRNA synthetase, putative /
arginine--tRNA ligase, putative similar to SP|P37880
Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA
ligase) (ArgRS) {Cricetulus longicaudatus}; contains
Pfam profiles PF00750: arginyl-tRNA synthetase, PF03485:
arginyl-tRNA synthetase N-terminal domain
Length = 642
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = -3
Query: 307 SSLSGRTTTIRKPSSEYGNSINRAPSSLFSV*GNCSCRCIVGFFTVVLESTWKSFSTVSL 128
S + G+ T + P + + P+S + +CS GF VVL + W + S ++
Sbjct: 110 SIIKGKGTQFKGPPAVGQALVKSLPTS--EMVESCSVAG-PGFINVVLSAKWMAKSIENM 166
Query: 127 ALNGMSQWPWKNITLKRA 74
++G+ W +++KRA
Sbjct: 167 LIDGVDTWA-PTLSVKRA 183
>At3g17640.1 68416.m02253 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to
receptor-like protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 396
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = -3
Query: 478 SNIFETPISGNKLLRSNPLFTSNLGSSKLTAALVGCNLNTSSRRPLSAAFCNTDFKPSSL 299
SN+ +S N+L S P F + L +L ++ N +++ +P+S+ + D K + +
Sbjct: 138 SNLHTLDLSYNQLSGSLPPFLTTL--PRLKVLVLASNHFSNNLKPVSSPLFHLDLKMNQI 195
Query: 298 SGR 290
SG+
Sbjct: 196 SGQ 198
>At4g00510.1 68417.m00070 cyclic nucleotide-binding
domain-containing protein contains Pfam profile: PF00027
cyclic nucleotide-binding domain
Length = 175
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 312 LKSVLQKAAERGLLEDVFRLQPTSAAVNLELPKF 413
+KSV ER L+ED+ L+P V+ P F
Sbjct: 118 IKSVSDSDKERCLVEDILYLEPLDVRVSPNCPSF 151
>At1g19140.2 68414.m02381 expressed protein
Length = 312
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 396 LELPKFEVKSGLDLNNLLPEIGVSKI 473
L+L + SGLDL NL+P +SK+
Sbjct: 146 LQLLMDRIDSGLDLQNLIPSERISKL 171
>At1g19140.1 68414.m02380 expressed protein
Length = 311
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 396 LELPKFEVKSGLDLNNLLPEIGVSKI 473
L+L + SGLDL NL+P +SK+
Sbjct: 146 LQLLMDRIDSGLDLQNLIPSERISKL 171
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 418 TSNLGSSKLTAALVGCNLNTSSRRPLSAAFCNTDFKPSSLSGR-TTTIRKPSSEYGN 251
T+ G + T+ + L T S P + + KPSSL+GR TTT+ + + GN
Sbjct: 687 TNTSGRGRKTSEI---KLVTQSSLPKFSDLKKENTKPSSLAGRNTTTMMRTQARNGN 740
>At4g16563.1 68417.m02506 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 499
Score = 26.6 bits (56), Expect = 9.9
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Frame = -3
Query: 433 SNPLFTSNLGSSKLTAAL---VGCNLNTSSRRPLSAAFCNTD----FKPSSLSGRTTTIR 275
S+ L + ++GSS +L G +L RP + C + PSSLS TT+
Sbjct: 81 SDYLISLSVGSSSSAVSLYLDTGSDLVWFPCRPFTCILCESKPLPPSPPSSLSSSATTVS 140
Query: 274 KPSSEYGNSINRAPSSLFSV*GNC 203
S + + PSS NC
Sbjct: 141 CSSPSCSAAHSSLPSSDLCAISNC 164
>At3g24650.1 68416.m03095 abscisic acid-insensitive protein 3 (ABI3)
identical to abscisic acid-insensitive protein 3
GI:16146 SP:Q01593 from [Arabidopsis thaliana], (Plant
Cell 4 (10), 1251-1261 (1992))
Length = 720
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 288 VLPDKLDG------LKSVLQKAAERGLLEDVFRLQPTSAAVNLELPKFEVKSGLDLNNLL 449
V+PD+ G L+ +LQK ++ + ++ R+ LP+ E + G+ L +
Sbjct: 554 VVPDRRQGWKPEKNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISL--AM 611
Query: 450 PEIGVSKIFD 479
+IG S++++
Sbjct: 612 EDIGTSRVWN 621
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,695
Number of Sequences: 28952
Number of extensions: 233144
Number of successful extensions: 820
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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