Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_L01
         (111 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   3.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    19   3.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    18   8.2  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 59 CCIFLMFVIQINV 97
          CC+ LMF    NV
Sbjct: 8  CCLLLMFSYTDNV 20


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 105 LMSTLICITNIKNIQQL 55
           ++S L C+  +  IQQL
Sbjct: 386 IISNLDCVNEVIGIQQL 402


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 67  YTTIIFINYK*IMYF 23
           Y+T+ F+NY   ++F
Sbjct: 210 YSTLHFVNYIDDLFF 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,166
Number of Sequences: 336
Number of extensions: 142
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 17
effective length of database: 116,873
effective search space used:  2220587
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)