Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K23
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    25   0.39 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.3  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 502 VEDEESLEACALVSEFCGCGRG 437
           VED +S+E C  +     CG G
Sbjct: 193 VEDVDSVECCGALKNIVACGAG 214


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -2

Query: 512 HRTSGR*GIPGGLCIGQRVLRMRSRTKSTIS 420
           H   G  G+ G L +G+R+LR+ +  +++I+
Sbjct: 206 HVVGGLTGLIGCLTLGRRILRLDAIDEASIA 236


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 247 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 342
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 148 PSRHFRSGLR 119
           P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 402 SLHHWKGNRRLGPRPHP 452
           S HH  GN  +GP   P
Sbjct: 333 SPHHQHGNHTMGPTMGP 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,042
Number of Sequences: 438
Number of extensions: 4298
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)