BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_K23 (552 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 25 0.39 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.1 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 6.3 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 8.3 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 8.3 >AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate dehydrogenase protein. Length = 363 Score = 25.4 bits (53), Expect = 0.39 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -3 Query: 502 VEDEESLEACALVSEFCGCGRG 437 VED +S+E C + CG G Sbjct: 193 VEDVDSVECCGALKNIVACGAG 214 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 23.0 bits (47), Expect = 2.1 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -2 Query: 512 HRTSGR*GIPGGLCIGQRVLRMRSRTKSTIS 420 H G G+ G L +G+R+LR+ + +++I+ Sbjct: 206 HVVGGLTGLIGCLTLGRRILRLDAIDEASIA 236 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 21.4 bits (43), Expect = 6.3 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = +1 Query: 247 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 342 E A H+ + D+EPTV RQL Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 21.0 bits (42), Expect = 8.3 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -3 Query: 148 PSRHFRSGLR 119 P RH+RSGL+ Sbjct: 139 PLRHYRSGLK 148 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.0 bits (42), Expect = 8.3 Identities = 8/17 (47%), Positives = 9/17 (52%) Frame = +3 Query: 402 SLHHWKGNRRLGPRPHP 452 S HH GN +GP P Sbjct: 333 SPHHQHGNHTMGPTMGP 349 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 164,042 Number of Sequences: 438 Number of extensions: 4298 Number of successful extensions: 8 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 15827139 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -