Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K23
(552 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 262 1e-70
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 262 1e-70
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 260 3e-70
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 260 3e-70
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 242 9e-65
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 242 9e-65
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 231 3e-61
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 125 2e-29
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 124 5e-29
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 122 2e-28
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 122 2e-28
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 121 3e-28
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 121 4e-28
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 120 6e-28
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 120 9e-28
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 119 1e-27
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 91 6e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 90 8e-19
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 1.2
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 29 2.1
At1g75400.1 68414.m08759 expressed protein 28 3.6
At1g25510.1 68414.m03168 aspartyl protease family protein contai... 28 3.6
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 4.8
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 4.8
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 4.8
At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P4... 27 6.3
At3g13330.1 68416.m01678 expressed protein 27 6.3
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 27 6.3
At1g35420.1 68414.m04394 dienelactone hydrolase family protein l... 27 8.3
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 262 bits (641), Expect = 1e-70
Identities = 113/124 (91%), Positives = 123/124 (99%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 RIRK 456
RIRK
Sbjct: 121 RIRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 262 bits (641), Expect = 1e-70
Identities = 113/124 (91%), Positives = 123/124 (99%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 RIRK 456
RIRK
Sbjct: 121 RIRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 260 bits (638), Expect = 3e-70
Identities = 113/124 (91%), Positives = 122/124 (98%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 RIRK 456
RIRK
Sbjct: 121 RIRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 260 bits (638), Expect = 3e-70
Identities = 113/124 (91%), Positives = 122/124 (98%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 RIRK 456
RIRK
Sbjct: 121 RIRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 242 bits (593), Expect = 9e-65
Identities = 104/124 (83%), Positives = 117/124 (94%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 445 RIRK 456
R+RK
Sbjct: 121 RVRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 242 bits (593), Expect = 9e-65
Identities = 104/124 (83%), Positives = 117/124 (94%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 445 RIRK 456
R+RK
Sbjct: 121 RVRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 231 bits (564), Expect = 3e-61
Identities = 97/124 (78%), Positives = 115/124 (92%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 445 RIRK 456
R+RK
Sbjct: 121 RLRK 124
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 458 LADQCTGLQGFLIFHXXXXXXXXXXXXLLME 550
LAD CTGLQGFL+F+ LL+E
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 125 bits (302), Expect = 2e-29
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 255
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 256 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 435
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 436 VLDRIRK 456
VLD +RK
Sbjct: 116 VLDVVRK 122
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 124 bits (298), Expect = 5e-29
Identities = 55/124 (44%), Positives = 79/124 (63%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 445 RIRK 456
+RK
Sbjct: 120 VVRK 123
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 122 bits (294), Expect = 2e-28
Identities = 55/124 (44%), Positives = 77/124 (62%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRK 456
+RK
Sbjct: 119 VVRK 122
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 122 bits (294), Expect = 2e-28
Identities = 55/124 (44%), Positives = 77/124 (62%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRK 456
+RK
Sbjct: 119 VVRK 122
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 121 bits (292), Expect = 3e-28
Identities = 56/124 (45%), Positives = 78/124 (62%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRK 456
+RK
Sbjct: 119 VVRK 122
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 121 bits (291), Expect = 4e-28
Identities = 54/124 (43%), Positives = 79/124 (63%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 445 RIRK 456
+RK
Sbjct: 120 VVRK 123
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 120 bits (289), Expect = 6e-28
Identities = 55/124 (44%), Positives = 79/124 (63%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRK 456
+RK
Sbjct: 119 VVRK 122
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 120 bits (288), Expect = 9e-28
Identities = 55/124 (44%), Positives = 78/124 (62%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRK 456
+RK
Sbjct: 119 VVRK 122
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 119 bits (287), Expect = 1e-27
Identities = 54/124 (43%), Positives = 77/124 (62%)
Frame = +1
Query: 85 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRK 456
+RK
Sbjct: 119 VVRK 122
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 90.6 bits (215), Expect = 6e-19
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = +1
Query: 88 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 267
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 268 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 441
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 442 DRI 450
D I
Sbjct: 120 DMI 122
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 90.2 bits (214), Expect = 8e-19
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Frame = +1
Query: 88 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 267
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 268 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 441
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 442 DRI 450
D I
Sbjct: 120 DMI 122
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 163 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 312
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 234 VEGVVSTPDGLVSWHLTIR--LDAVLKAIQLP 145
+ G+ PDG SWH+T+ +D+ L + LP
Sbjct: 272 IAGISQVPDGEASWHVTVSKYMDSPLLSAALP 303
>At1g75400.1 68414.m08759 expressed protein
Length = 455
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 200 TRPSGVETTPSTRSSARPELASTFPVPSSS 289
T P G TP+++ SA PE+++ VP SS
Sbjct: 83 TPPDGHLGTPASQKSATPEMSTNSMVPPSS 112
>At1g25510.1 68414.m03168 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 483
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 363 DKLFWMKQLSVCASADLVNY--SGFKIDEDGTGNVLASSGLAEERVE 229
D +++ + +L+ S F++DE G+G ++ SG A R++
Sbjct: 326 DTFYYLGLTGISVGGELLQIPQSSFEMDESGSGGIIIDSGTAVTRLQ 372
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 4.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 151 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 318
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 319 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 447
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 4.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 151 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 318
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 319 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 447
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 4.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 151 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 318
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 319 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 447
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P450
77A3p, Glycine max., PIR:T05948
Length = 512
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 250 TGAGKHVPRAVFVDLE-PTVVDEVRTGTYRQLFHPEQLITGKEDA 381
T AG +P V V++ P + ++ R + F P++ + GKEDA
Sbjct: 392 TLAGYDIPAGVNVEVYLPGISEDPRIWNNPKKFDPDRFMLGKEDA 436
>At3g13330.1 68416.m01678 expressed protein
Length = 1711
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 62 KFKKLNTKCVSASLYTLAKPESRSEMPAGSCIALSTASNL 181
++ +L +KCV + L KP+ + + GSC LS+ S L
Sbjct: 938 RWPQLLSKCVLSLTENLRKPDVQEYVVLGSCAILSSHSVL 977
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 220 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 354
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
>At1g35420.1 68414.m04394 dienelactone hydrolase family protein low
similarity to dienelactone hydrolase [Rhodococcus
opacus] GI:23094407; contains Pfam profile PF01738:
Dienelactone hydrolase family
Length = 310
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 532 ETRTGATTERVEDEESLEACALVS 461
ET GA V+D+E EAC LV+
Sbjct: 63 ETSDGAINVEVDDDEEEEACELVN 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,992,913
Number of Sequences: 28952
Number of extensions: 299681
Number of successful extensions: 1012
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -