Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_K22
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   8.3  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 519 CFWTPGIALHWNQVKNYNNY 578
           C W+  I   WNQ ++Y+N+
Sbjct: 56  CIWS--IFNKWNQFRSYSNF 73


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 346  KEKDERILWKKNEVADYEATTYAIFYNNALFLTIVIL 456
            + K+E+    K  +     + +A F  NALF+ +V L
Sbjct: 1249 ENKEEKARIAKELIELRNKSVFAFFMFNALFVLVVFL 1285


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 346  KEKDERILWKKNEVADYEATTYAIFYNNALFLTIVIL 456
            + K+E+    K  +     + +A F  NALF+ +V L
Sbjct: 1249 ENKEEKARIAKELIELRNKSVFAFFMFNALFVLVVFL 1285


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 232 VQVTKYSQRSLKQTMQEPSSLP 167
           +Q  KY++R +K+T++   S+P
Sbjct: 41  LQELKYTKRCIKETLRLFPSVP 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,667
Number of Sequences: 336
Number of extensions: 3202
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)