BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_K21
(638 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 25 1.5
AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase... 24 3.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 3.5
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 24 4.7
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 6.2
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 8.2
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 23 8.2
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 25.4 bits (53), Expect = 1.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 87 DANALKLEWGTDRDGDRG 140
D NA EWG+ R+G RG
Sbjct: 186 DFNAWHEEWGSGRNGQRG 203
>AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase
alternate isoform protein.
Length = 257
Score = 24.2 bits (50), Expect = 3.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 386 ENKEHRLTPNYHWVEVPQMSPCVVFV 309
++ ++ N+ V+VPQ P VVFV
Sbjct: 221 KDSSKKIVNNFRSVQVPQQVPEVVFV 246
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 24.2 bits (50), Expect = 3.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 469 PPLCPQPRLSPSPSTYLPSFNAW 401
P + P P + PS ++ PS AW
Sbjct: 346 PDIPPAPNMWPSMTSQTPSAKAW 368
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 23.8 bits (49), Expect = 4.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 487 AGLSKTPPLCPQPRLSPSPSTYLPSFNAW 401
+G++ PPL +P P T F +W
Sbjct: 309 SGITGVPPLPADGPSNPGPQTQTEGFYSW 337
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.4 bits (48), Expect = 6.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 87 DANALKLEWGTDRDGDRG 140
D NA EWG+ R DRG
Sbjct: 134 DFNARHEEWGSPRTCDRG 151
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.0 bits (47), Expect = 8.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 87 DANALKLEWGTDRDGDRG 140
D NA EWG+ R +RG
Sbjct: 180 DFNAWHEEWGSRRSNERG 197
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.0 bits (47), Expect = 8.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 87 DANALKLEWGTDRDGDRG 140
D NA+ L+WG+ R +G
Sbjct: 122 DFNAMHLDWGSSRTCPKG 139
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,985
Number of Sequences: 2352
Number of extensions: 14635
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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